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Domain assignment for ENSLOCP00000001135 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000001135
Domain Number 1 Region: 36-120
Classification Level Classification E-value
Superfamily PDZ domain-like 8.54e-23
Family PDZ domain 0.02
Further Details:      
 
Domain Number 2 Region: 175-274
Classification Level Classification E-value
Superfamily PDZ domain-like 3.94e-18
Family PDZ domain 0.00095
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000001135
Domain Number - Region: 449-592
Classification Level Classification E-value
Superfamily Tropomyosin 0.0019
Family Tropomyosin 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000001135   Gene: ENSLOCG00000001005   Transcript: ENSLOCT00000001139
Sequence length 668
Comment pep:known_by_projection chromosome:LepOcu1:LG13:342858:370848:-1 gene:ENSLOCG00000001005 transcript:ENSLOCT00000001139 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EMPTFSVMYKGAVIISRTLMGPYGVDRAVHALDFTDCENGLGIKVIGGVKELTGEEYGVY
VKRILPGGLASGDGHLQPGDQILEVNGESLIGVTSEKAVDILRAASATNHMRLHIARDEE
ARREFAELLEKYGSNSNTGSARSSPIQHAGRYLDSTSSGSSSRSQSPLLLSPAGSQSGPL
LRSLSHPGEGVIQLISVSRSSGLGITIGGGSNRPDGPAVFIQEILSGGDCHKDGRLRPGD
QLIAMNKESLIGVTHEEAKSTLNKVKFRQEGTVEIAFIPGKGSLSSSNSMHNGVQRNAGN
GYSSSRLRVHVRSPETRQEDPLSVPSSSPDSCAPDIHVSGSAPSPKEAALAKPKVSLDPH
VRLKTEKLDLALIYLGLDVPEEGRRKLRQSLTTDPQGTVAFGDFVEATRDVLQDKLEEAG
LAQGPFLFSYHEAASLMDTSAFHSPTYDSERPCSTDNLEQFQSEVAQLQQQMKQLKVLLK
DTEHSKNTLQEELQRTTEKASATIAENENLKSKLQVAEAVQQQTNSAEQDYEEVIRLLEA
EIRDLKNELAGKRQKKGLEATKEDVIELKRRLSMIDCRLRKSELTRKHLEISNKKLLGFA
QNVHKVLTSSSLFGSENGINTKLPDAQAGGGLDFPDPAGLLAAEAKLLVDCVYSFSTDDT
NEIPKHNY
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Identical sequences W5LYC8
ENSLOCP00000001135

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