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Domain assignment for ENSLOCP00000002057 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000002057
Domain Number 1 Region: 1410-1709,1775-1873
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.66e-76
Family RNB domain-like 0.00028
Further Details:      
 
Domain Number 2 Region: 2355-2442,2477-2834
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.55e-55
Family Extended AAA-ATPase domain 0.079
Further Details:      
 
Domain Number 3 Region: 744-1207
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.74e-44
Family Extended AAA-ATPase domain 0.039
Further Details:      
 
Domain Number 4 Region: 1268-1351,1385-1439
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.000000000411
Family Cold shock DNA-binding domain-like 0.0078
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000002057
Domain Number - Region: 270-310
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000238
Family Classic zinc finger, C2H2 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000002057   Gene: ENSLOCG00000001770   Transcript: ENSLOCT00000002062
Sequence length 2849
Comment pep:known_by_projection chromosome:LepOcu1:LG18:2719166:2747074:1 gene:ENSLOCG00000001770 transcript:ENSLOCT00000002062 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTDFHLQSFLWTYDLQVACFSCAIKKNEITFEIRTVKHQCAGSVLLARQRGSGNAWKHIS
RRPEFPVPYKYEVCWFFKIGHGCQKHGNRCTFARSEEEAAVWNFQKARQLSYSTLAEMVK
AIQVPVDQRAQLKQLGVAEKIRANFNGQFLEVCEDCLYSSPQQISLRGQMMVCNSCSKHA
WKPVLVHFQTGEHGKAVFHEIRPLPASTTLQYYRYVINGEPCWHGHRRCWFAHSEVEMAV
WVAEAKEGLKRPNLLRQPQRQVAPTQAQAPASPPAQTYYCKACCLKFSSKDSFMNHCSSL
DHARMISEDRGTEWRHRPPPGNLTQGFELCSRPDTCEYGQNCVAAHSTEELQEWILRTRS
AQKRMRAAQEQGLLSYQDLLLKEYRSSGNEVHIMSSCVPGVSVTCSEDLTMSSKEDHLEW
KWTFHVESERPLVHVALLKHEQGAVFTLGDICPEGPCTYATGNTFCTSHMSCDVPVTFKS
LSPGFYEQWVVFDFDMRPVLLQKLRVRVGQRSPTPPAETPEGSGPCGQSLERWHRGNRMI
VPCLERTEAEESLLKEYKPPQLNLRYKPRAEGTEPLTRENYRDGMHSFLYREELAQEELL
ERLSLKVTVTLMDTSGKKQDRTRERSAEVPVPYALTPDTVNGYLLRTAVQSALLAPSHPT
DNKVYEAVISWEASSENTIFLHLSKRCCSDLGLLKDTTREMEVQFQLNRLQFCEWHQAVD
LLPDVGIVLPDVTACSVPVHSGTFSKLNAKQSAAMAYIIGDTDGVRPVAPLLIYGPFGTG
KTYTLASAAMEIVRQPDTKVLICTHTNSSADIYLKDYFHTWVNAGNTVPLRIKSNKRGVA
VSATNHITLRYCLLSEDGESFIFPDKKTLDSRRIVVTTTMTARRFQALKLPPGYFTHILI
DEASQMLECAALMPLALAGEGTRVVLAGDHMQMGPKLFSEEEGRHSDHTLLNRLFHFYQG
ETHEVASRSRIIFNENYRSTREIVEFVSTHFYVGKSDAIKAKGDVPPHPQFHPLMFHHVR
GSCHWDRITSSYFNCEEIDQVAEIVQSLLHNWPSQWGDPSQRTICVASEGKQVDFIRQKL
RSKKLGKITVENLLNIQGRQFRVVVMTTIQTRDSLLSLSSATLEFFNEPRVLNTAMTRAQ
SQVIVVGDAAALCYFGKCSKIWRSYIAQCIEKGSAFPQHLTMEHIDQEVKETARFNRTGE
EDISDTESVDSDLSDIDDPILLELLDESKDIRVTVTSEGLLDIVQNNYFTGSGEYQRPEE
EPPFDYTESSLETLLRDNPSEYKHCELVLERYDSGYAWPLDQPTLHIKIQGKKNIGRAFP
GDQVIVKIISNENSLPSGKVVGVLKVADHSRVFVCTIEHYDKQVMTPINICIPKIYTPFF
QKKPNVIAVRKYENGMWIKTKCIKINEESKMNNLFVVQVLKWRNNFIYPLGVVKEVLPRV
TSLEGGLKVLDIEYQLTRNPPSVQDELAKFEDLRLDGKNRKDYREYTTFTVDPKNSEDLD
DAISVRDLGKWFEIGVHIADVASFVTKDCPIDKDARRRGMTYYSPGKEPVYMFPRSLSIK
DFSLLPNSNRHTISLMVTVDKKTERIVESSFTFSVIRSDRKISYEEAEEIIQKYSGNEYR
FNTVEDCLAVAYRFSRVHRKNRLLGDWYYESLDEDVNPGERRSHEMIKELMIMFNCTVAE
FLISNTVTAKVTPIRCQNTPHPEQVYEFQSKYTSFIPLSIHLSYHFKHSSSAVADDMCCI
LTSLWTELKSAVRNRDLDKIIDLIATDDIHPWLLPVLLEFRKLLSKAYIIRSNSTYHSKV
GHYIMQLDSYTWASSPIRRYMDVIIQRHLHAVLRNTAAQYTVKEIDLFCAEFPQKHEKQV
SYSKIVQSLNLASKLKSQTIQKVAFVVEVFPTGNSFKVSFPLNHSSLPHLHSVSYRDLQL
ASQPMYDDQSQCMILVWSQRVYSMQNSKIHSEIQQQRPNTYLTPVLTDTWQQIVSALRTG
DWERVLSLFENINSGVNKRDFAQFPENTEKHYAELSLKLKTGGILQVQLGTDTKRGMLVP
QIQLLIIHPKFEVCLEHARNPIECFSEYAIRASKQQYVDYLEYQRVWKPLCEMESAFNAV
AENDSIVFEDTAVQWKMKSKSDKLEGFFQLTLAHKKLWCVECDLRKCFLCIRVRDQSRNS
RENQFGLESSGHAPLSDQVDPKFFTWVAHGVTTKITDEEESKKLSYIQIDFYINHVPMKN
IPDSIFQKGTAFTVELIPKLLPDVRKEDAVSNLARANELVKNIILGKKTLPHDRFKFSFP
EASQVATPLREVRAAERKSPRTLSALCVQPVICYSLVFLGTRLRIYSFIRFAGAGVVRLR
HQHFLIEGFGSLGLPHLNESQNIAKRKALENPFTLIQGPPGTGKTVVGVHIVYWFFQQNK
DRRTPRKTKETEGTPVKKDCILYCGPSNKSVDVVAEYLLKFQSMLRPLRVYSDQMEMLEF
PYPGSTLKLSRKSLREEKPKESLRSISLHHLIRMPGKPYADQILRFDVRIRSGDNLTDEE
VDTHKKILNAARQQELENHDVILCTCTAASNPNFTQKLNPRQILIDECAMATEPEALIPL
VAHKPEKIVLLGDHMQLRPIVHSELLKRLGMKKSLFERYMDKALMLDTQYRMHEDICEFP
SKEFYHGLLKTGTKRKGSVLLAGRRATSILFGHVEGKEMSLIVSTEQGNENSKANMEEAE
QCVRIARLLTKHSRIQPDHIAILTPYNAQISKINELLKKSEIYNVTVSTIMKSQGSEWRY
VILSTVRSCPSSELETEPTKAWLTKTLGFVIDPNQVNVGITRAQEGFCVIGNKDLLTCSA
LWKRLIDHYQQKNCVMDANDIRVQNTSAH
Download sequence
Identical sequences W5M100
ENSLOCP00000002057

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