SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000002340 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSLOCP00000002340
Domain Number - Region: 237-275
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.1
Family SAM (sterile alpha motif) domain 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000002340   Gene: ENSLOCG00000002020   Transcript: ENSLOCT00000002345
Sequence length 348
Comment pep:known_by_projection chromosome:LepOcu1:LG3:1674919:1680555:-1 gene:ENSLOCG00000002020 transcript:ENSLOCT00000002345 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MERHPADDETWGPPGSDQEQSLPHKQNQAARVIQRAWRRHIDTHVFKYYKDLISFRKKGD
PRLLLRYVNPKEADLLDAAAGVHIRFRLGGTKFPPSIYYKIFTHRPIVDMCANSPKDYTC
PAARRPLPGQIHNRGRAAGQEDRSGWYRREENNGWRLLSGKIWLMGDPVTLDSAAKKTEF
HYSRIQRRQEVGRRRKQRKIDWMKKMYEDGLLQARTEDPDAALLVDKAAEGMMAAVDQLG
PSHVLEWEVDELLEWTNSLNFEEYMNGWKETAMSGFSESYKGSRLVVSQHDQCEFTRFSR
EGSQAAADCSALTCHVSSQYQSYSTPLLSRASMAEHGSHSRQIKQLPL
Download sequence
Identical sequences W5M1T2
XP_006627950.1.81211 XP_015196664.1.81211 XP_015196665.1.81211 ENSLOCP00000002340

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]