SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000002391 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000002391
Domain Number 1 Region: 21-86,229-271
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000128
Family Gluconate kinase 0.049
Further Details:      
 
Domain Number 2 Region: 393-437
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000893
Family HkH motif-containing C2H2 finger 0.034
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000002391
Domain Number - Region: 275-335
Classification Level Classification E-value
Superfamily Flavoproteins 0.0307
Family Quinone reductase 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000002391   Gene: ENSLOCG00000002057   Transcript: ENSLOCT00000002396
Sequence length 476
Comment pep:known_by_projection chromosome:LepOcu1:LG6:2600653:2636739:-1 gene:ENSLOCG00000002057 transcript:ENSLOCT00000002396 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AVMMAAASLALQNTLKKGVVPPLVVILGATGTGKSKLAIEIGRRMQGEIISADSMQVYRG
LDIITNKVTAEEQELCPHHMISFVDPLVSSFTVVDFRNRALPLISSRHIEDMHQREKMPI
IVGGTNYYIESILWKVLLDTKQDDGQGNGAGDSPRRRAELEKLGGPELHRRLAEVDPDMA
SMLHPHNTRKIARSLQVLQEMGIPHSRLLQEQREQEGADGLGGPLRFDGPCIFWLHAELP
ALDARLEERVEDMLSAGLLEELKDFHERYNEQKLQDSGQDYQHGIFQSIGFKEFHEYLTA
GTDRSEEERQKLMSKGIEALKQATKRYARKQNKWVRNRFLKRPGSSAPPVYGLDVTDVSH
WDETVLAPALQILDSLRKGQRPAAEPLAPGAEERGSKRRRHACELCERVIIGDLEWTAHL
KSKSHLHQVRKKKKKLESASGSQGSSCVSPRQAGVANIHPGSDPACRTDSAAGTAV
Download sequence
Identical sequences W5M1Y3
ENSLOCP00000002391

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]