SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000003376 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000003376
Domain Number 1 Region: 201-312
Classification Level Classification E-value
Superfamily PH domain-like 7.7e-37
Family Pleckstrin-homology domain (PH domain) 0.0063
Further Details:      
 
Domain Number 2 Region: 121-216
Classification Level Classification E-value
Superfamily PDZ domain-like 7.23e-26
Family PDZ domain 0.0003
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000003376
Domain Number - Region: 337-445
Classification Level Classification E-value
Superfamily PH domain-like 0.0218
Family Pleckstrin-homology domain (PH domain) 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000003376   Gene: ENSLOCG00000002866   Transcript: ENSLOCT00000003383
Sequence length 553
Comment pep:known_by_projection chromosome:LepOcu1:LG23:5258723:5302909:-1 gene:ENSLOCG00000002866 transcript:ENSLOCT00000003383 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVWTRADKNGLLDLLLRDRWIRVLAELTRETLTLTADAEPIGPGGSADYSPSPGLWNGL
SNGTDTGYAFGSPGSGRIAQDNGTSSDLGSPGSSYGSPGSSFSSTGPLRLGDTHPGLESA
GSEAVRRVRVVKQESGGLGISIKGGRENRMPILISKIFPGLAADQSRALRVGDAILSVNG
NDLREATHDQAVQALKKAGKEVTLEVKYIKEVTPLFKKPSLVADLAWDGVPPQSPSLSGS
EDSGSPKHCASSKDRKVIPLKMCFISRNLTMPDLESRLIELHSPDGRNTLVLRCQDAPTA
HSWFTAIHANIAALLPQVLAQLGSTLGSSSASSHREVKHIGWLAEQIKLDGGRHQFRPVV
MALTEKDILLYDSVPWTREAWAAPCQSHPLLATRLVHSGSARSSPALGSELVFATRTGTR
QGIEAHLFRVETHWDLSSWTRMLVQGCHSAAELIKEVSIACTLNGQDVRLSIHYENGFTI
TREGAGPGSTTVLYRYPFEKLKMSGDDGIRSLFLDFGGPEGEMVLDLHSGPKPVVFVLHS
FLSAKVTRMGLLA
Download sequence
Identical sequences W5M4R8
ENSLOCP00000003376

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]