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Domain assignment for ENSLOCP00000003413 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000003413
Domain Number 1 Region: 394-518
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 4.08e-31
Family DEP domain 0.0000153
Further Details:      
 
Domain Number 2 Region: 2-82
Classification Level Classification E-value
Superfamily Ubiquitin-like 6.51e-24
Family DIX domain 0.0024
Further Details:      
 
Domain Number 3 Region: 239-349
Classification Level Classification E-value
Superfamily PDZ domain-like 1.01e-22
Family PDZ domain 0.0000342
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000003413   Gene: ENSLOCG00000002858   Transcript: ENSLOCT00000003420
Sequence length 778
Comment pep:known_by_projection chromosome:LepOcu1:LG25:5470484:5525752:-1 gene:ENSLOCG00000002858 transcript:ENSLOCT00000003420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAETKIIYHIDEEETPYLVKLTVPPEKVTLADFKNVLNNRAVNNYKFFFKSMDQDFGVVK
EEISDDNAKLPCFNGRVVSWLVLAESSHSDGGSQCTESQPELPPPLERTGGIGDSRPPSF
HANAVGSRDGLDTETGSESLLSHRRERERERARRRAREVEFPRVNGHSKAERAARDSAMG
YDSASMMSSELESSSFIDSEEEEDASRLSSSTEQSSSSRLMRRHKRRRRRHKVAKIDRSS
SFSSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNDRGDGGIYIGSIMKGGSVAADGRI
EPGDMLLQVNDVNFENMSNDDAVRILREIVSKPGPISLTVAKCWDPSPRSYFTIPRAEPV
RPIDPAAWITHTTALTGPYPHYEFDDLPLSVSKTDMATIVKVMQLPDSGLEIRDRMWLKI
TIANAVIGADVVDWLYSRVDGFKDRRDARKYASSLLKHGYLRHTVNKITFSEQCYYTFGD
LCQNMASLNLNEGSSGGGSEQDTLAPLPPPATNPWPMGGQPFPYPPYPSAPPGFPPGYSD
PCHSFHSGSAGSQHSEGSRSSGSNPSTGKSRRPSPREKDRKSTGSGGSESELGTRGGRRG
ERSASQMSHHSHAHSSHSHTTSHRSHTHSLHSHASFSYTQAVYTQHSHTSCSHSERSHAS
SYGPPGLPPPYSLARLGSKAPVSSGPPGAPPVRELGAVPPELTASRQSFQHAMGTSVQPV
SWAAVAVAGIVSTAYNASAHQHLHRRWRCSREQLDCSWRARKELHPRSPELVSASSVL
Download sequence
Identical sequences W5M4V5
ENSLOCP00000003413

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