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Domain assignment for ENSLOCP00000006270 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000006270
Domain Number 1 Region: 1-404
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.46e-81
Family L-arabinose binding protein-like 0.00016
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000006270
Domain Number - Region: 415-458
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000871
Family TNF receptor-like 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000006270   Gene: ENSLOCG00000005211   Transcript: ENSLOCT00000006278
Sequence length 759
Comment pep:known_by_projection chromosome:LepOcu1:LG25:9252164:9258260:-1 gene:ENSLOCG00000005211 transcript:ENSLOCT00000006278 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRFAVEEINNSTSLLPNVSLGYEIFDYCSDSHNLQAALDFLSKKLTRVIPVVDRITEYLP
KVLTVIGPFGTTESLVIAPLFGSYGVPMISPGASSLRLSDKINNPSFLRTIPSDKNQVRV
IIQLLRRFNWNWVAFVGSGDDYSNDALREFDKEARLVGICVPYQTTLPQDTSKIGALFDS
IATVNVSVVVVFSTRIYAIPFIKAAVANNVRDKVWIASEAWSMNEELARMPGIDTIGTVI
GITTGGLAPLEGFEEFVRKTLAHRDGEICSDSSRSAVEETCNQDCPACANVTLENLLSPD
PSYRLRVYSSVYLAAHALHQLLGCDAKYCRRSDPVLPHMVLKKLKTVNFTLYGRTIKFDV
NGDPIPSYDFVVWDRTSPRFYKKIGSYTSDPEPIFVLNASLIRWFSNGTVPVLTCSAECE
AGYRRTSTGAHSCCFDCEPCLNGTFVNHTADPYKCVKCETDEWSENGSSCTKRSQEYLHY
TDLVSIGLFLSATILISLSIAVGAVFVWNRNTPVVKSAGGKMCFFMLGCLIVSCTTIFSF
HGVPHGWTCMLRFPVFTVFYTACLSCLTVRSFQIVFIFKMAAKLPKAYDFWVKHNGQWLT
IMACVAIQIILCTIWIGVEGPRPFNNTVAYKDQIIFQCSLGNLYGLFTVTSFTAFLSILC
FGFSYMGTDLPKNYNEAKSITISLLVLFISWISYFTSRMVYQGKYLEVINAGSVLSTLYG
ILLCYFVPKCCIILFKPDQNTPAHFQSCIQNYTKTISTK
Download sequence
Identical sequences W5MD11
XP_015192565.1.81211 XP_015192566.1.81211 ENSLOCP00000006270

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