SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000008061 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000008061
Domain Number 1 Region: 178-294
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.52e-17
Family Ypt/Rab-GAP domain of gyp1p 0.0099
Further Details:      
 
Domain Number 2 Region: 54-196
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 0.00000128
Family Ypt/Rab-GAP domain of gyp1p 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000008061   Gene: ENSLOCG00000006680   Transcript: ENSLOCT00000008071
Sequence length 323
Comment pep:known_by_projection chromosome:LepOcu1:LG18:13368378:13374990:-1 gene:ENSLOCG00000006680 transcript:ENSLOCT00000008071 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MYLKKSESLGVSSPLNGIGKKDCDPKRKRKVAEITQALSVTPVDVATLRRMAISEGGLLT
DEIRCLVWPKLLNVQTDDLPEKPGAELRENNKDYQQVLLDVRRSLRRFPPGEMQTPVFVQ
EQELRNVSPFSLIHIIDCVYGLFSFRVVTMSFARCQVYVSSLFLLCRDFMDPTMDNTKHI
LNYLMPIIERVNPEVHDFMQRAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPL
MPIYFAAVIVLHRESEVLECECDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELA
REATQQHSQQTAASTFKDFELAS
Download sequence
Identical sequences W5MI52
ENSLOCP00000008061

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]