SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000010736 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000010736
Domain Number 1 Region: 270-373
Classification Level Classification E-value
Superfamily Cystine-knot cytokines 9.89e-32
Family Transforming growth factor (TGF)-beta 0.00037
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000010736
Domain Number - Region: 154-225
Classification Level Classification E-value
Superfamily Nitric oxide (NO) synthase oxygenase domain 0.0314
Family Nitric oxide (NO) synthase oxygenase domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000010736   Gene: ENSLOCG00000008826   Transcript: ENSLOCT00000010751
Sequence length 374
Comment pep:known_by_projection chromosome:LepOcu1:LG12:19057102:19062410:-1 gene:ENSLOCG00000008826 transcript:ENSLOCT00000010751 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQHSQILIYLGLLVAFGSVGLGNITAQQPSDTVEDGEQCSACDFRRQSKLMRLHSIKFQI
LSKLRLKQPPNISRNVVEQLLPKAPPIRELLDQYDVLGDDNKDASLEEDDDHAITETIMT
MATEPDSTVQVDRKPKCCLFSFSPKIQPNRIVRAQLWIHLRPADEPTTVFLQISRLKPAT
DGNRHIRIRSLKLDINAGNPSWHSVDVKQVLQVWLKHPETNWGIEINAFDSSGKDLAVTS
PEAGEEGLQPFMEVKISDTPKRLRRDSGLDCDENSPESRCCRYPLTVDFEDFGWDWIIAP
KRYKANYCSGECEYMHLQKYPHTHLAIKANPRGTAGPCCTPAKMSPINMLYFNGKEQIIY
GKIPSMVVDRCGCS
Download sequence
Identical sequences W5MQS7
XP_006636687.1.81211 ENSLOCP00000010736

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]