SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000011097 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000011097
Domain Number 1 Region: 491-663
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 2.33e-48
Family Ypt/Rab-GAP domain of gyp1p 0.0037
Further Details:      
 
Domain Number 2 Region: 645-741
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.05e-18
Family Ypt/Rab-GAP domain of gyp1p 0.025
Further Details:      
 
Domain Number 3 Region: 810-936
Classification Level Classification E-value
Superfamily EF-hand 0.0000000000000677
Family Calmodulin-like 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000011097   Gene: ENSLOCG00000009091   Transcript: ENSLOCT00000011113
Sequence length 1270
Comment pep:known_by_projection chromosome:LepOcu1:LG4:25189440:25233542:1 gene:ENSLOCG00000009091 transcript:ENSLOCT00000011113 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKMWVNPEEVLLASALWITERANPYFILQKRKGHGGGGGGGGGLAGLLVGTLDVVLDSSA
RVAPYRILYQTPDSLVYWTIAHGGSRKEITEHWEWLEQNLLQTLSIFENENDITTFVKGK
IQGIIAEYNKNHDIREDDDTEKFKEATAKFRKLFGMPEEEKLVNYYSCSYWKGKVPRQGW
VYLSINHLCFYSFLLGKEAKLVIRWADITQLEKNPTLLLPDIIKVSTRSNEHIFSVFLNI
NETFKLMEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRAL
FRLPKDEKLDGHTDCTLWTPFNKMHIVGQMFVSTNYICFTSKEETLCSLIIPLREVTIVE
KADSSSVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYFDREIMGSYNS
SDDEVYSRQSSLLSCSPQRSLGSEIEGERQFNLNDNSVPTATQALMTMYRRRSPEEFNPK
LAKEFLKEQAWKNHFTEYGQGVCMYRTEKTKDLVLKGIPENMRGELWLLFSGAINEMATH
PGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIG
YCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVP
QLYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANI
DKLLNCKDDGEAMTVLGRYLDSVSNKDSTLPPIPHLHSLLTDDGEPHPEVDIFKLVRSSY
EKFGTIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEH
LTSCYWGGNSNPTDRHDPSLPYLEQYRIDFEQFKGLFGLLFPWACGAHSDSLAMRFFRLL
DQNGDSFINFREFVTGLSVLCHGDLTEKLKLLYKMHVLPEPAHEQEEPDSAFEATQYFFE
DITPETSLGLDPKSKNDKDDGFVTVTFKTEKVKKTHTPDYRTYLRLWNQESKSKLENMKE
LPKLNQGQFIELCKTLYNMFSEDPNEQDLYHATATVTSLLLEIGEVGKLFCSPAGGEDNR
DIKDSAMGQAKGDSLFQQNGQGDPFLSGMTTQGEGEAKFCSSGACGEQPLCSQMEDIKLE
DSSPKDIGMSSAMLISDDETKDDTSMSSYSVLSAGSHEMEEKLQCEDIADDTVLVRSNHG
NSLPHSTSIDKDWAITFEQFLASVLTEQALVIYFEKPVEIVARISNAKNIRKVGRQIISA
SDYEISTLSG
Download sequence
Identical sequences W5MRT8
XP_006629570.2.81211 ENSLOCP00000011097

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]