SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000013073 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000013073
Domain Number 1 Region: 299-371
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 9.52e-18
Family PCI domain (PINT motif) 0.0000394
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000013073
Domain Number - Region: 115-220
Classification Level Classification E-value
Superfamily TPR-like 0.024
Family Tetratricopeptide repeat (TPR) 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000013073   Gene: ENSLOCG00000010665   Transcript: ENSLOCT00000013101
Sequence length 411
Comment pep:known_by_projection chromosome:LepOcu1:LG2:43027550:43043573:-1 gene:ENSLOCG00000010665 transcript:ENSLOCT00000013101 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FRGEKMAAAVRQELAQLMNSSGSHKDLAGKYRQILEKAIQFTGAEQLEALKAFVEAMVNE
NVSLVISRQLLTDFCTHLPNLPDSTAKEVYHFTLDKIQPRVISFEEQVASIRQHLATIYE
KEEDWRNAAQVLVGIPLETGQKQYNVDYKLDTYLKIARLYLEDDDPVQAEAYINRASLLQ
NESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKSIVHESERLEALKHALHCTIL
ASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTAD
GSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQI
DGIVHFETREPLPTWDKQIQSLCFQVNNLLEKISQAAPEWTAQAMEAQMSQ
Download sequence
Identical sequences W5MXG4
ENSLOCP00000013073

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]