SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000013176 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000013176
Domain Number 1 Region: 1229-1292
Classification Level Classification E-value
Superfamily TB module/8-cys domain 7.85e-20
Family TB module/8-cys domain 0.0000554
Further Details:      
 
Domain Number 2 Region: 478-545
Classification Level Classification E-value
Superfamily TB module/8-cys domain 2.09e-18
Family TB module/8-cys domain 0.0005
Further Details:      
 
Domain Number 3 Region: 755-869
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000683
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 4 Region: 1410-1468
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.00000000000000824
Family TB module/8-cys domain 0.001
Further Details:      
 
Domain Number 5 Region: 359-428
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.000000000000314
Family TB module/8-cys domain 0.0031
Further Details:      
 
Domain Number 6 Region: 934-1040
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000957
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 7 Region: 661-787
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000251
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 8 Region: 426-473
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000561
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 9 Region: 1570-1655
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000643
Family Growth factor receptor domain 0.0093
Further Details:      
 
Domain Number 10 Region: 1040-1163
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000895
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 11 Region: 866-916
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000195
Family EGF-type module 0.01
Further Details:      
 
Domain Number 12 Region: 1350-1394
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000024
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 13 Region: 1319-1365
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000015
Family EGF-type module 0.019
Further Details:      
 
Domain Number 14 Region: 1157-1193
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000126
Family EGF-type module 0.01
Further Details:      
 
Domain Number 15 Region: 2-37
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000239
Family EGF-type module 0.029
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000013176
Domain Number - Region: 210-239
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0299
Family EGF-type module 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000013176   Gene: ENSLOCG00000010749   Transcript: ENSLOCT00000013204
Sequence length 1657
Comment pep:known_by_projection chromosome:LepOcu1:LG7:8918486:9016869:1 gene:ENSLOCG00000010749 transcript:ENSLOCT00000013204 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CQPPCQNRGSCSRPHTCVCRSGFQGPRCEEVAPEQVYVRTKGAIRKADVPEVVQKCERRM
SCIYLLLSAPSNPININKNVAPINIHSTQIRPGHAESSSHQTGTSRTVKRYPSPNGQITS
NALPNGNGQLHVSQQPASTPQSFNSAVDPKGANLTANIDRIKIVFTPMICKRVCRSGQCF
NSCEKGDTTTIYSENTQSQVSKSGFRMYFCQIPCMSGGHCIGRDQCWCPSNSTGKFCHLP
APPPGKHSTARKESGHSGRNSSHTMYTLPLSNQLASMHPSLVNVHIQHPPEAEVQIHQVA
RVKPDQVSPGSEQNSINGWQSVRSVQQRSQAGDGHGSSRQHGSTSGNGDVHSRLHNRLNG
HVGRCFQETIDGQCGKPLPGLTKQDDCCGSVGASWGLNKCTACPPKPAYAVIANGKVECP
KGYKKMNQTHCQDINECLMSGICRNAMCLNTRGSYRCTCAPGYMLDTSRSHCISDKAVSV
TPGMCYRSVSGGTCSLPLSQHITKQICCCSRVGRAWGQGCERCPLPDTADHFKEICPAGH
GYTYSLSDIQISLRQAEEEELAQTSHTQHEHHRTSDAQQTVRVPTANVNILKFTSPHPPQ
FSEKLPAVTEAPPKFPGASQWFSRPPRSQSMQSNTSSHIIPTVNAISDIVVTSEPQKETE
DIDRCSATPNVCGPGVCVPVQGGYTCYCSNGFHLNTLQTRCVADIDECKRDPCEGKGHCV
NSVGSYTCYCYTGYSQVITQNRRSCQDVNECDMPNKCPGSVCINTEGSFTCKCENGYTMS
RRGQCEDIDECRNPSTCPSGRCINTPGSFQCLSCDAGYRAQSGRCIDVDECLLPGVCSHG
NCVNLEGSYRCSCNLGYQESPDSKSCEDVDECSLANVCPGRLCKNTQGSFYCRSCEEGYE
LSEDGYGCEDVDECLSPGACPTGVCSNTEGSYTCTTCDGGYKLSADKGSCEDQNECDDAD
SCVGGDCINTPGSYSCSCPHGYELIDGSTCRDVNECLSPDICGLSGECLNAEGSFFCLCS
PGYTIVGDGMGCQAPDVDECSEGTMCSRGQCLNTDGSFQCVCETGYKFSHEAGDCEDMDE
CKEYGTGICGTWRCENTLGSYRCFMGCASGVYGEDARDCEDIDECTNKTICGKHGICENM
DGSYRCLCDQGYTSPPGNPECVDINECEMSTALCGTAFCENVEGTFLCLCPNENEEFNPL
TSQCHNPLLTVHFTEIHLGVPIFPTDEKERKECYYNLEDDNFCDNVLSRNTTMQECCCTV
GAGWGDNCEIYPCPPAGRVEYDELCPHGKGVLSVDSPSLGLAQQLFKAFPDADECEMFGS
EICTDGSCVNIYSGYSCYCRMGYYYDTIRLACLDHNECEVEDTCVDGTCVNTPGSFNCFC
SPPLLLDSTRRRCIAANFTDEDHLNPDERIHMEICWQRLTENSMCSNPLLNKRTTYTECC
CLYGVAWGDQCAFCPSRLSAHYATLCNKPQRGLEGADGHRERPGYEYGPDSPVYGPGYGD
IAGGQYYHNLGPEYGPQDPHTGIIFPGQDPTDDYGSRERARVPVLRPREFAPRLVDPYRD
RYDGFEGLRAEECGILNGCENGRCVRVREGYTCDCFDGFELDLAKMACIDINECEDISDK
VPLCQNGACVNTEGSYKCTCLSGFVASSQPHQCIPEA
Download sequence
Identical sequences W5MXR7
ENSLOCP00000013176

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]