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Domain assignment for ENSLOCP00000015132 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000015132
Domain Number 1 Region: 145-228
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 3.81e-21
Family La domain 0.0000454
Further Details:      
 
Domain Number 2 Region: 222-301
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000264
Family Canonical RBD 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000015132   Gene: ENSLOCG00000012290   Transcript: ENSLOCT00000015161
Sequence length 735
Comment pep:known_by_projection chromosome:LepOcu1:LG9:40011744:40063913:1 gene:ENSLOCG00000012290 transcript:ENSLOCT00000015161 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTSDQDTKVVAEPQVQQVQEAKESSHLESAKVSDLNPNAKVWANHMFNLEATGSTNRSAH
KSWKDTSEISEDPCPEGYEANSDKNKQYHQEPLLPDPDELPPTALTEQADMNAVTLECPD
TVYAEFESIHEPSRTGGNELLQTDSQEDLREHLKKTLEFCLSRENLASDMYLISQMDSDQ
YVPIMTVANLDHVKKLSTDMDLIVDVLRSLPLVQVDEKGEKVRPNQNRCIVILREVPEST
PLEEVESLFKGENLPKFIHCEFAYNDNWFITFESEADAQQAYKYLREEVKTFQGKPIKAR
IKAKAIAINTFLPKNGYRPLDVNLYAQQRYTTSFYIPPVYSPQQQFPLYSLITPQTWSTT
HSFLDPALVAPFPNTGFINGFTTSPNFKPATSPLTVRQYSPRNRNQSKPHLRPAIPNADR
GSGLLDSPTIFNFPTERLLNGVRSPQTRPPGQNRTRLQTSIGYPKRDIGTGRVEPISADC
SPSMGRGRKNVYGYRKKREDKFTRVPTQSPPPQKPPSPSFELGLSSFPPLPGAAGHLKTK
DVFGNRLSNIVIGTSKDKNVNVDATTNTIPSGISKEPSLPTTSPLPVSFEGSPSPPQSPD
EVKVEEEKQSEAQTPVERLTATFTTTASKSVQVNGAATELRKPSYAEICQRTAKDAPTLQ
PPKEPKPAGATVVSDDSAGEKMESKSRETYSVKAIPGRSREVKRQPGRRPSPPPPLQGPG
KRPNKDLNTPPKSPQ
Download sequence
Identical sequences W5N3C3
ENSLOCP00000015132 XP_006634569.1.81211 XP_015210292.1.81211 XP_015210293.1.81211 XP_015210295.1.81211

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