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Domain assignment for ENSLOCP00000015871 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000015871
Domain Number 1 Region: 378-442
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000131
Family C-terminal fragment of elongation factor SelB 0.072
Further Details:      
 
Domain Number 2 Region: 145-312
Classification Level Classification E-value
Superfamily TPR-like 0.0000664
Family Tetratricopeptide repeat (TPR) 0.016
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000015871
Domain Number - Region: 285-368
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.0432
Family Apolipoprotein A-I 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000015871   Gene: ENSLOCG00000012886   Transcript: ENSLOCT00000015901
Sequence length 514
Comment pep:known_by_projection chromosome:LepOcu1:LG15:6171794:6183751:-1 gene:ENSLOCG00000012886 transcript:ENSLOCT00000015901 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKETTAKRREKPRESKPEKQPESGPESQDVEMPEEDAAGSGKPHRELDTLTLEDIKEHVK
QIEKAVSGKEPRFVLRALRALPSTSRRLNPNVLHKAISGFFTSNAAGREFLLSYLEEPMD
TEGDVQFRPRTGKAAATPLLPEVEAYLQLLLVVYLTNNKRYTEAQKVSDHLLQKISSQNR
RALDLVAAKCYYYHSRVYEFLNKLDAVRSFLHARLRTATLRHDADGQATLLNLLLRNYLQ
YNLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTLTNALRKAPQHT
AVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLE
QFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLSDIAQKLQLDSPEDAEFIVAK
AIRDGVIEASINHDKGYVQSKETIDIYGTREPQLAFHQRISFCLDIHNMSVKAMRFPPKS
YNKDLESAEERREREQQDLEFAKEMAEDDDDSFP
Download sequence
Identical sequences W5N5G2
ENSLOCP00000015871 XP_006638287.1.81211

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