SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000016174 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000016174
Domain Number 1 Region: 191-299
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 3.4e-16
Family Ypt/Rab-GAP domain of gyp1p 0.011
Further Details:      
 
Domain Number 2 Region: 45-115
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 0.0000288
Family Ypt/Rab-GAP domain of gyp1p 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000016174   Gene: ENSLOCG00000013127   Transcript: ENSLOCT00000016204
Sequence length 308
Comment pep:known_by_projection chromosome:LepOcu1:LG9:49329467:49340200:-1 gene:ENSLOCG00000013127 transcript:ENSLOCT00000016204 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KQHISVIEQKILKVMSEDPQRNFRSAYYEKVGFRGVEEKKSLEILLKDDRLDVEKLCTFS
QRFPLPSMYRIFVWKVLLGILPPHGDSHALVMSYRKQQYEDVLQALQVMRFVQSSTPQVE
VYLHMHQLESLALPRRTEVTPLEPEAEDFLAIARAMAKIVESSVDCYWLIKCFVNQYSNK
YGDSVPHLPKSLEHFLSLEDSRLLNHLRTCNAMSKLPYNLWFRRCFAGCLPESSLQRVWD
KIISGSCKILVFVAVEILLGYKIMLMGMNKPEDITQFLENMPQENTDAIVTKAIDLWHKH
CGTPMHSV
Download sequence
Identical sequences W5N6B5
ENSLOCP00000016174

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]