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Domain assignment for ENSLOCP00000018203 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000018203
Domain Number 1 Region: 838-933
Classification Level Classification E-value
Superfamily PDZ domain-like 5.13e-17
Family PDZ domain 0.0014
Further Details:      
 
Domain Number 2 Region: 121-180
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000000112
Family Nucleotide and nucleoside kinases 0.0027
Further Details:      
 
Domain Number 3 Region: 639-728
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0000000000000276
Family PDZ domain 0.028
Further Details:      
 
Domain Number 4 Region: 261-299
Classification Level Classification E-value
Superfamily WW domain 0.0000000000114
Family WW domain 0.0018
Further Details:      
 
Domain Number 5 Region: 22-100
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0000000000122
Family PDZ domain 0.03
Further Details:      
 
Domain Number 6 Region: 959-1007
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0000000146
Family PDZ domain 0.0032
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000018203
Domain Number - Region: 304-360
Classification Level Classification E-value
Superfamily RING/U-box 0.0441
Family RING finger domain, C3HC4 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000018203   Gene: ENSLOCG00000014780   Transcript: ENSLOCT00000018235
Sequence length 1007
Comment pep:known_by_projection chromosome:LepOcu1:LG1:3081624:3116931:1 gene:ENSLOCG00000014780 transcript:ENSLOCT00000018235 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKAAVKKLHWRSKVQESFVPLGGASGELGVSIGGGADYGEFPFVTSVQGGGTNVGDVIL
EIGGTPVLGMTLGDVRGVLNSCPHPIRIKTVSPGSTLCKDLRLYLSKCFTPGSMDSQLQQ
VIRENLYLRAVPCTTRLPRDGEISGVDYNFVSVEEFFSLEESGALLESGKFKGNYYGTPR
PVHIGPESPPITYQEHRNLLRNFRTRSKSLSNLEKTGEEGENSEEDSGLSGGSLGVSSGA
PPGLSPSQSRDSSGGDGSTMENGGAGLPENWEMAFSDSGEPYYIDHTSKTTSWLDPRTQN
RESVPKPESKRGRCRLCDSLTSDPRACTAHCLHNRCRICEEGAVTLTEKHCHVSRMCLSP
LPVSANALFSLFIKLLLLPLFFSGSLLSRKTCCPLSSLTLPLSCSCVLKSGASVLLSLGT
GASVLLSPGRRAHTFPYSTGTGAGPVPDSPCVGTGFRLTITRSPHNSLFRPDTVNVISLS
LSPSPPSGGVSADESVCLNVALTLFLLPSFPQPSSLFFSSHFSCLSPISPLLRPSLHSSL
YPLPPPSLLSSLNLFFNAHQKSPALCLPSPPGGASLPHSGDPAVKQSPKTGCFCASAVVF
SSWRFSTCHFQGVPHAVQPRRLPQAARGPAPPRGGGGGGGELVPVAVGRSEQGMGFSVTA
GGQGGRLAVVKRVWDRRQCPSLQPGDAILKINGADVQSLSFAQVQRVLQEHTHQGEVVLL
VYRGGSLRSPLSPGIPKRTPHLLQPLAPQNGAPPGGGAALLPSPEGSAPQPGTTGGAPDL
APAATPDLIPSPTSLVQSTSFLDSVPVTLTLEPRDWLSPEEGGRGAAGGQGDWHGALVSR
TVEVELRRRAGEGFGFVIASQDAESGRAASLLPHKFIQIRRGSPADRSERIHPGDRLEGI
NGQSVLSLPHRELAEIFRRAGNTIRLRIVPRSSTNSNLSEPTEVDTESRVRKGHRSRHKD
ARYYSVDLERGPTGFGFSLRGGSEYNMGLYVLGLMEGGPASRSHKIQ
Download sequence
Identical sequences W5NC44
ENSLOCP00000018203

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