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Domain assignment for ENSLOCP00000018204 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000018204
Domain Number 1 Region: 140-231
Classification Level Classification E-value
Superfamily PDZ domain-like 3.29e-22
Family PDZ domain 0.0000714
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000018204
Domain Number - Region: 19-54
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0103
Family PDZ domain 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000018204   Gene: ENSLOCG00000014784   Transcript: ENSLOCT00000018236
Sequence length 304
Comment pep:known_by_projection chromosome:LepOcu1:LG1:3153795:3192560:1 gene:ENSLOCG00000014784 transcript:ENSLOCT00000018236 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGCNMCVVQKPEEQYRVMFQVNGKELSRLSQEQTLEALRASRDPLVIQVLRKSPRVKGGA
AGGTGGQGGPAPALDFVDNGTQTDISFQHILALGKLQPPSPPLPPLLEPYVLSELPALEH
EYYDPNDYLDSSHHEVDRQDELEYEEVELYKSSQQDKLGLTVCYRTDDEEDLGIYVGEVN
PNSIAAKDGRIREGDRILQINGMDVQNREEAVAILTREDSTNISLLLARPDIEGDDRLIL
LGNEAIDIPGNRASREHARQEGCPGVSRRHNLLLLLLQGGLDIAVTSASGGLADLVPRLE
ENRR
Download sequence
Identical sequences W5NC45
ENSLOCP00000018204

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