SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000019725 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000019725
Domain Number 1 Region: 975-1084
Classification Level Classification E-value
Superfamily PDZ domain-like 1.08e-26
Family PDZ domain 0.0000248
Further Details:      
 
Domain Number 2 Region: 258-356
Classification Level Classification E-value
Superfamily PDZ domain-like 3.42e-24
Family PDZ domain 0.00000941
Further Details:      
 
Domain Number 3 Region: 743-858
Classification Level Classification E-value
Superfamily PDZ domain-like 4.73e-24
Family PDZ domain 0.0000137
Further Details:      
 
Domain Number 4 Region: 600-710
Classification Level Classification E-value
Superfamily PDZ domain-like 4.86e-24
Family PDZ domain 0.0000404
Further Details:      
 
Domain Number 5 Region: 425-530
Classification Level Classification E-value
Superfamily PDZ domain-like 3.94e-20
Family PDZ domain 0.0000264
Further Details:      
 
Domain Number 6 Region: 137-174
Classification Level Classification E-value
Superfamily WW domain 0.000000000000742
Family WW domain 0.0011
Further Details:      
 
Domain Number 7 Region: 184-219
Classification Level Classification E-value
Superfamily WW domain 0.0000000049
Family WW domain 0.0035
Further Details:      
 
Domain Number 8 Region: 2-83
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000292
Family Nucleotide and nucleoside kinases 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000019725   Gene: ENSLOCG00000016013   Transcript: ENSLOCT00000019757
Sequence length 1307
Comment pep:known_by_projection chromosome:LepOcu1:LG8:21167205:21550643:-1 gene:ENSLOCG00000016013 transcript:ENSLOCT00000019757 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELEKSGALLESGTYEDNYYGTPKPPAEPTPLLLNVTDQILPGARPSAEGKRKRNKSVSN
MEKAGIDPPEEEEEERPVVNGNGVAITPESSEHEDKSTDASGEIPPQPYTTPTFGHTEGP
KEEGEPAKQPTKPDENEELGPLPDNWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPP
EECKEDELPYGWEKIDDPIYGSYYVDHINRRTQFENPVLEAKRRLQQQQMPNQDLSSQPL
QAVQVFREKPLFTRDATQLKGTFLSTALKKSSMGFGFTIIGGDEPDEFLQVKSVIPEGPA
AQDGKMDTGDVIVYINDVCVLGHTHADVVKLFQSVPIGQSVSLVLCRGYPLPYDPEDPAS
SMISPMGMMERPPVLVNGRSNYDNYMEYLSRTSRFMQDHTEQLPQQSLPPHPGDTHLDGQ
LPPPIHEDNVSMASSGATQSELMTITIVKGADGFGFTIADSPTGQRVKQILDAQGCPGLC
EGDLIVEINQQNVQSLSHTQVVDLLKECPMGSETSLVIQRGGECHFSPWKTSKQVLEQWD
VQGSPQTSLSAPVIPQNVPFPSNFHRASFPDSADGFDQRKPDPYELYEKSRAIYESRQQG
PPRTAFRMDSTGSHLMLGLEYRELDVHLRRQKSGFGFRILGGDEPGQPILIGAIIEKSSA
DRDGRLRPGDELVFVDGIPVAGKTHRYVIDLMHGAARNGQVNLTVKRKVQGTGEPCPENG
RSPGSVSTQHSSPRSDFTATTFPNNTHQPNAGTSSPEGFVSHSLQTNDVVIHRKENEGFG
FVIISSLNRPESGSTITVPHKIGRIIEGSPADRCGKLKVGDRILAVNSQSIINMPHADIV
KLIKDAGLSVTLRIIPQEELSNNYTRPRDQLQVAVMWIPQYPTEHITKISSCRTASIKTC
VVLLRLPVAQRYYYLDSYRSEVKARQDVKPDIRQPPFTDYRQPPVDYRHPPVADYRQPPT
LDYRHPPLLDYRQHSPDARQFPIPDYRQPQVRDFDYFTVELEKSMKGFGFSIRGGREYKM
DLFVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGT
GQVPEYADSPTPWDAPSTTSPTLPEVAPCLDTMTMPLPSSHPALPSDPIHLLPLERGKET
SRSMEKAEHSQSPRKADQLKPVQASGKRSAERSGGGKSKEGGRPTSGGSAIRGKGTPEDV
TDQAKLRGAAPEQQDQPKASKTTRGRSKERKAESATASEKRPAERSSRGIKLDLNGGAQS
NGKNPGSTTEPAKEKRDGEPTRISGSGAARKSTVSPGPWKIPGSDKL
Download sequence
Identical sequences W5NGG6
ENSLOCP00000019725

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]