SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000022224 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000022224
Domain Number 1 Region: 8-151
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 0.00000209
Family Pentapeptide repeats 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000022224   Gene: ENSLOCG00000018123   Transcript: ENSLOCT00000022265
Sequence length 159
Comment pep:novel chromosome:LepOcu1:LG9:17265081:17265560:-1 gene:ENSLOCG00000018123 transcript:ENSLOCT00000022265 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NQTLYCSHLLSETLHCSHLLSETLHCSHLSSETLHCSHLTSETLHCSHLTSERLHCSHVS
PETLHCSHLPNQTLYCSHLLSETLHCSHLTSETLHCSHLPNQTLYCSHLSHETLHCSHLS
PETLHCSHLTSETLHCSHLPNQTLHCSHLSPETLHCSHL
Download sequence
Identical sequences W5NNL5
ENSLOCP00000022224

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]