SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000003887 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000003887
Domain Number 1 Region: 467-652
Classification Level Classification E-value
Superfamily ADP-ribosylation 1.15e-47
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.01
Further Details:      
 
Domain Number 2 Region: 332-410
Classification Level Classification E-value
Superfamily WWE domain 2.62e-20
Family WWE domain 0.003
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000003887
Domain Number - Region: 227-258
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000903
Family CCCH zinc finger 0.0042
Further Details:      
 
Domain Number - Region: 262-318
Classification Level Classification E-value
Superfamily WWE domain 0.00419
Family WWE domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000003887   Gene: ENSLOCG00000003293   Transcript: ENSLOCT00000003895
Sequence length 660
Comment pep:known_by_projection chromosome:LepOcu1:LG14:4465974:4483113:1 gene:ENSLOCG00000003293 transcript:ENSLOCT00000003895 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEKTLGACSKRTETPDKSPDAPSLGLAKTSGEFSSQMPLSDKIPLVKPYLKKKHAQRKLD
AKCLRALDPLFTTLLNSDALVGGDGVFVPRNQPRNQTNLCEAAVEKNSTLSQICLKEDGA
VSGLVSGAETDEISDSGAGLGQCEQKAAVGTPEEPRFQAQASEEKNPGVVVSPGQGAPMS
GLYAAPEPLRGASCLAEKDADLKSGIFQDKSEEASLDLVFELLTQLQYHTHQGDGVSICV
DFLRGVCVYGSDCPQHHTVLPYHWQIRKADTRIWLSVSDDSQEHLERLYCNPDNDQVRLK
YQGRVFSLDFSLMQVCDVEFDLVRRLATPSSTSLTSNCHMVWKYYCRDSFGWREYSEPVV
RLIEEATCRGLKEVRFVTLQNQYILNIREGFQQNAIFGFRRQIKRRPLFLSSVMLMPYLQ
TLCGLSSAIFPTAGPTPTQPLSPTSPTSPKVYPETWLPMDSLQDFIQVPVSKDDKSYRTV
YSLFHKTVSETKFRILKILRVQNPFLWEKYKRKKEYMSRKMTEVDRVLNERHLFHGTSQD
VVEGICKHNFDPRVCGKHATMFGQGSYFARKAVYSHNFSKRSPRGIHCMFLAKVLTGKFT
VGNPSMRRPPPLNPHDASSDLFDSCVDNWVDPQIFVIFNDDQSYPYFIIQYEEVSNTVSI
Download sequence
Identical sequences W5M679
ENSLOCP00000003887 XP_006637623.1.81211 XP_015216365.1.81211

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]