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Domain assignment for ENSLOCP00000009194 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000009194
Domain Number 1 Region: 28-237,278-516
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.7e-73
Family Integrin alpha N-terminal domain 0.00000347
Further Details:      
 
Domain Number 2 Region: 844-1067
Classification Level Classification E-value
Superfamily Integrin domains 1.88e-52
Family Integrin domains 0.00038
Further Details:      
 
Domain Number 3 Region: 681-837
Classification Level Classification E-value
Superfamily Integrin domains 8.89e-28
Family Integrin domains 0.0021
Further Details:      
 
Domain Number 4 Region: 516-679
Classification Level Classification E-value
Superfamily Integrin domains 5.75e-23
Family Integrin domains 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000009194   Gene: ENSLOCG00000007555   Transcript: ENSLOCT00000009205
Sequence length 1141
Comment pep:known_by_projection chromosome:LepOcu1:LG12:16381008:16413024:-1 gene:ENSLOCG00000007555 transcript:ENSLOCT00000009205 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RAMAFSATSFFISFSLICLLKRTHVSAFNLDTVNVLRRNGEPGSLFGFSLALHRQLHPAE
KRILLVGSPRAKALKNQKANVTGGLYSCEISPQLGDCKRIEFDNEADLSSESKENQWMGV
TVQSQGPGGKIVTCAHRYQRRMFVGSAQESRDITGRCYVLSENLQINEGSEEDGGNWKFC
EGRTRGHERFGSCQQGLSATFTKDYHYVVFGAPGAYNWKGIVRVEQKNSTLVDLGIYEDG
PYEVGDETQFDANLVPVPDNSYLGVLFMTALSAADPDQFVYKSLPSQVNVGKAVDVMANS
YLGFSLDSGHNLIQKGQLTIVSGAPRAKHSGAVVLLKTGGTESRVLNKEFVLEGPGLASS
FGYDVAVVDLNSDGWQDIVVGAPQYFVKDGETGGAVYVYINKNGKWDQITPIQLNGTKDS
MFGLAVENIGDINLDGFQDIAVGAPYDDAGSGKVYIYHGSKSGITTKPAQVLEGRDHNIK
LFGYSLAGNMDLDRNSYPDIAIGSLSDSVFVYRSKPVVNIVKEITITPKDIDLKKPAPCL
DGKGFCLTVKACFEYTANPKDYNPRLTMDFTFEADSDRRKINLQPRVSFSERKATDPDNQ
YSGTLELRGQNQKKCIQAEGKLQDTTDKLRGIPIAVSVAIKNAKRRKRQSALAELVPVLS
SELPTRSETKVNFVKEGCGTDNICQSNLDFKYKFCSREHNRDVFHPLPVENGVPVISLSN
QEDIALEVTVTNMPSRDRDGDDAYEAKLVALLPDTLSYSAARTLNAPSDKQVTCTANQNG
SRADCDLGNPFKSKSVVTFYIILSTSGITLDTTQVEIDLQLETASEQKNLPKLKANAKVL
IALLLSVSGVARPSQVYFGGTVKGESAMRKEDDIGSLVDYEFRVINLGKPLKSFGSASLN
VQWPKEAANHKWLLYLMKVSATGTKRIDCTPRGEVNSLNLTPSSSSRKKRETEQRQTPGE
GKFSLFMDKRKYTTLSCGNGTQCVEIRCPLQGLDNNPIIVLRSRLWNSTFLEDYSTLNYL
DILVKASLSLDASAKNIVLKNAETQVKLTVFPEKTVAKYTGAPWWIILVAILAGILMLAL
LVFLLWKCGFFKRSKYDDSVPRYHAVRIRKEERQFKDGKTKLVKLEKKQWMTTWNENESY
S
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Identical sequences W5MLD5
ENSLOCP00000009194

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