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Domain assignment for ENSLOCP00000012706 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000012706
Domain Number 1 Region: 9-89
Classification Level Classification E-value
Superfamily PDZ domain-like 1.18e-22
Family PDZ domain 0.00054
Further Details:      
 
Domain Number 2 Region: 282-311
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000131
Family LIM domain 0.0024
Further Details:      
 
Domain Number 3 Region: 253-281
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000175
Family LIM domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000012706   Gene: ENSLOCG00000010368   Transcript: ENSLOCT00000012730
Sequence length 332
Comment pep:known_by_projection chromosome:LepOcu1:LG6:27446923:27475916:-1 gene:ENSLOCG00000010368 transcript:ENSLOCT00000012730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPQTVTLIGPSPWGFRLVGGRDFSTPLTISRITPGSKAAQAELNPGDTIVAINGDSTESM
THMEAQNRIKACTDQLVLSISRSETKIWSPTGTEDGKTNPFKVNLEAEPQGFRPIGSGYN
RRAAQYVTDVPLNNGNSKSALQYNNPVGLYNNNNTEATLPKQMTNLRLGSSNSPEPQIHS
PSSKNGFDTQSEVYKMLQDYEEPSAEPKQSGSFRYLQGILQAEDSAERPAVKSVKSPVRS
PVPKLGSPLPGFQLPECTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGYFFIED
HLYCETHAKARVQPPEGYDVVAVYPNSKVELV
Download sequence
Identical sequences W5MWE7
ENSLOCP00000012706 XP_006631855.1.81211

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