SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLOCP00000018181 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLOCP00000018181
Domain Number 1 Region: 278-380
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 4.32e-23
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.00054
Further Details:      
 
Domain Number 2 Region: 33-108
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000000000183
Family HLH, helix-loop-helix DNA-binding domain 0.0035
Further Details:      
 
Domain Number 3 Region: 122-176
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000249
Family N-terminal PAS domain of Pas kinase 0.086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000018181   Gene: ENSLOCG00000014750   Transcript: ENSLOCT00000018213
Sequence length 872
Comment pep:known_by_projection chromosome:LepOcu1:LG7:42295248:42323335:1 gene:ENSLOCG00000014750 transcript:ENSLOCT00000018213 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MENLVEFGSRCPTGRREWETSSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEIRQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLM
TDPIAADFLENETHIEFCCHLARGNIDPKEPPTYEYVKFVGDFKFHNYVPTSSCNSFELA
LPRPMQSSPEEQVCLVATVRLATPQFLKDLCNVEDPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHADDLELIARCHKQLMQFGKGKSCYYRFLTKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRRELGLEESNSEMASSSIKSHEVYPDVHQEV
PRERASGSQARSVSSHSSHKSSHTALSDSASNSSIRYTETSTPSRQSMGPEKPASRIQPS
SSKTLVPSQTASEILPQQHVPPSPASSQHSLMQPMYQFPPQLGVMHQLKEQLEERTRILQ
ADIKTQQQELHVIKEQLQLVNNSNLQMLLQQPAPVGFSSVQHQGPGRSSQPQQQQQSGVI
RQPSGHSKQPLMGSEHLCRPHSSSPHSLMREPSTPSPQVQQRAIHGSQMQPSSLPVQTHA
SLTMPLYSNPMMFSQTSSRQAQLPVSQDVSQQHSDADFNQDRQLRMLLNQPIQPLMPDSS
GSGQPSQCNTAMQQTKYTLDQQMVTPSLPLQQMNCSAVIVPSPVFTSPIMIPHNSFITHQ
AQPAYHQQPPVSQQPLQLQQHHQFFQMQPPGLLHSGQTQTLFHTTHLPQQSTIGYSQQQS
QQQQQQPQQQQLHHSQNQTGSLSDMRNMLLPR
Download sequence
Identical sequences W5NC22
ENSLOCP00000018181 XP_015206956.1.81211 XP_015206957.1.81211 XP_015206959.1.81211 XP_015206960.1.81211

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]