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Domain assignment for ENSLOCP00000018401 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000018401
Domain Number 1 Region: 10-85
Classification Level Classification E-value
Superfamily PDZ domain-like 5.65e-18
Family PDZ domain 0.00072
Further Details:      
 
Domain Number 2 Region: 316-345
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000285
Family LIM domain 0.0031
Further Details:      
 
Weak hits

Sequence:  ENSLOCP00000018401
Domain Number - Region: 283-315
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00159
Family LIM domain 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000018401   Gene: ENSLOCG00000014946   Transcript: ENSLOCT00000018433
Sequence length 361
Comment pep:known_by_projection chromosome:LepOcu1:LG1:5151747:5212815:1 gene:ENSLOCG00000014946 transcript:ENSLOCT00000018433 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EMSLTVNLIGPSPWGFRISGGRDFKKAIAVSKVNGGSKAESAGLRLGDVIAEINGESAAE
MLNVEAQNKIKSSKTKLQLVVDRSEPLSPGQTNGLTSPEHLAVRFQEALQPSRDENYNDY
SFSGPPSLSPTPYSAERKRDAHTTFSTKSFQTHSWSPVEKVASPRTSSRPVSQEFVTDVR
SNSLSRTPTPPGRYSPQSPREREPPLSPRRSSDAGMQRFDRDSEVYKMIQENKESRSAPR
QSSTFRLLQEVLEADEKGLPEAALRFPGKLSPNAPKPSSSVAGVQKFHTCEKCGTSIVTQ
AVRIMEDRYRHPECYTCTQCCLNLKMRGHFWVGDEMFCEKHAKERYQGPGSTHVPMVSPH
H
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Identical sequences W5NCP2
ENSLOCP00000018401

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