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Domain assignment for ENSLOCP00000020553 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000020553
Domain Number 1 Region: 19-67
Classification Level Classification E-value
Superfamily PDZ domain-like 0.00000998
Family PDZ domain 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000020553   Gene: ENSLOCG00000016638   Transcript: ENSLOCT00000020588
Sequence length 596
Comment pep:novel chromosome:LepOcu1:LG16:16381169:16388521:-1 gene:ENSLOCG00000016638 transcript:ENSLOCT00000020588 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NGHKRNRSFSDNLVLEEAEEGGIVVADIKDDSLAAARGLKEGDEIVGATIFFDNLKKDDV
VKLLKMTEPYNANMKVHTKHGQNAPGPVDVGYNKLFNSKIKKYLRPQQSLDGSLTLPGTR
VNGINTRLNKKLKNTGTNVSLPNLSDPDVLNLQGPNLKGGIKDPASTYKWPSMNITSPNT
QIQGPDLDIDAGMKTPKLNLSSPTFKGGINTPDSDINLPKADLKGPDLDFGPKVKGPDLD
IDADMKTPDLNFSAPKIKGGFNTPDLDVSLPKADLKGPNVDLKSPNLDLKTPTLDIDAPR
GKFKKSSLKMPDFGLSGPKTSNINGDFDMSFSNTQSHDVKLPKGNADLSTPGIEGPNVDM
KRPKVDIPDIDLEVPGGTLKRPKFKLPSFGTSQKKPKGPDLDMDAKIKTPNIDKSAPKIK
GSFGVPETDLDLKSPKLPGDIDLSAPQVQSNIKGPSFDVNKSQVKAGSQKATRSKPDLNM
DTGDGIPNTDCSVPQVKGAISTPKLDMSSPKGDFAFNISDLDLDGPDSNLMSSSLKPSFT
SPKMSHLDRDMDLNISPPKAGINATVPSLRGEITDPDLNVSLPNAPHIEAPHANVS
Download sequence
Identical sequences W5NIU4
ENSLOCP00000020553

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