SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|156744068|ref|YP_001434197.1| from Roseiflexus castenholzii DSM 13941

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|156744068|ref|YP_001434197.1|
Domain Number 1 Region: 251-483
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.29e-46
Family RecA protein-like (ATPase-domain) 0.00000031
Further Details:      
 
Domain Number 2 Region: 8-250
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.25e-39
Family RecA protein-like (ATPase-domain) 0.000000431
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|156744068|ref|YP_001434197.1|
Sequence length 510
Comment circadian clock protein KaiC [Roseiflexus castenholzii DSM 13941]
Sequence
MTQNPRQPAIEKLPTGISGFDLIANGGIPAGRTTLVSGTAGSAKTVFAAQFLAEGIRKYG
EPGVFVTFEEPPSDIRRNMESLGWDIPAWESEGRWAFVDASPQPGEEVLFAGNYDLGALL
ARIENAVRRIGAKRLSMDSLGAIFTQFADSAVVRRELFRVVSALKRMGVTAIMTGERTQE
YGDIARYGVEEFVADNVIILRNVLEDEKRRRTIEILKFRGTSHQKGEFPFTIMSGEGMVV
IPLSAIELKQRSSDIRVTSGNPELDRMCGGGFFRDSILLVSGATGTGKTLMTTEFMAGGV
NRGERCLLFAFEESREQLFRNATGWGVDFEQMERDGLLRVVCEYPETAGLEDHLIAMKKL
IQEFRPNRVAVDSLSALERVSTIRGFREFVISLTSFIKHQEIAGLFTATTPSLMGGESVT
ETHISTLTDSIILLRYVEMFGEMRRGLTVLKMRGSMHDKDIREFTIDNRGMHIGRPFRQV
TGILSGNPIHIAPGEIDRMNQLFNDDEQQS
Download sequence
Identical sequences A7NRI3
gi|156744068|ref|YP_001434197.1| WP_012122600.1.48654 383372.Rcas_4148

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]