SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|290960961|ref|YP_003492143.1| from Streptomyces scabiei 87.22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|290960961|ref|YP_003492143.1|
Domain Number 1 Region: 38-346
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 3.02e-70
Family alpha-L-arabinanase-like 0.0035
Further Details:      
 
Domain Number 2 Region: 336-481
Classification Level Classification E-value
Superfamily AbfB domain 7.59e-44
Family AbfB domain 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|290960961|ref|YP_003492143.1|
Sequence length 482
Comment arabinofuranosidase [Streptomyces scabiei 87.22]
Sequence
MRQLFTKAAVAGAAALAVLTTMATPAQAAAPASPAVTFTNPVAEQRADPHIFKHTDGYYY
FTATVPAYDKIVMRRSTTLQGLATAAETTIWTKHASGEMGAHIWAPEIHFIDGKWYVYFT
AGSSNDIWKIRPYVLETSAANPIAGTWTEKGRISLPLDTFSLDATTFTVGGTRYLSWAQN
DPAVGDGTNIYLAKMSNPWTIQGSPVMISRPTNAWEKVGHTVNEGPAVIQRGGKVFMTFS
AAATDANYCLGLLTASDSADLMNPVSWAKTPTPVFTSNARTGQYGPGHNTFTTSEDGKSD
ILVYHDRNYKDINGDPLNDPNRRTRYQKLYWNADGTPNFGIPVADGATPVRLSSFNYPDK
FIRHWEYRAKLEGNVTNLADSQFRIVTGLTGSGTVSLESANFPGYYLRHKNNEVWVEKDD
GTALFDADASFFQRAGLADTAAGVSYEAYNFPGRYIRHYENLMYTQPVSTALDRQDATFY
KE
Download sequence
Identical sequences C9ZFW3
gi|290960961|ref|YP_003492143.1| WP_013004160.1.11737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]