SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|284991319|ref|YP_003409873.1| from Geodermatophilus obscurus DSM 43160

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|284991319|ref|YP_003409873.1|
Domain Number 1 Region: 108-244
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 2.25e-21
Family GntR ligand-binding domain-like 0.01
Further Details:      
 
Domain Number 2 Region: 39-132
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 5.24e-16
Family GntR-like transcriptional regulators 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|284991319|ref|YP_003409873.1|
Sequence length 246
Comment GntR family transcriptional regulator [Geodermatophilus obscurus DSM 43160]
Sequence
MYCKGMSIPLKRQGLLAANLYDLVVSAEPLDLDSSAVASLADKAYVAIRDRLIMLDIRPG
DPIDDDELAKDLDVGRTPVREALKRLEGDRLVVSYPRRGTFATGMDISDLAHISDIRAQL
EPLAARRAAERAVRTAHAELEDLASRIQHLDVTQIDRTELMRWDLAVHRAIYRAAGNPHL
EDVLIRYDNLATRIFCLFLDRLPTVDEHVGEHVELLRAIAAGDADQADDLAREHVLGFER
AIRSVI
Download sequence
Identical sequences D2S7P3
WP_012948935.1.76031 gi|284991319|ref|YP_003409873.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]