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Domain assignment for gi|283456495|ref|YP_003361059.1| from Bifidobacterium dentium Bd1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|283456495|ref|YP_003361059.1|
Domain Number 1 Region: 295-344,383-634
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.04e-31
Family Tandem AAA-ATPase domain 0.012
Further Details:      
 
Weak hits

Sequence:  gi|283456495|ref|YP_003361059.1|
Domain Number - Region: 51-226
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 0.000981
Family HD domain 0.087
Further Details:      
 
Domain Number - Region: 45-117
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 0.00251
Family HD domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|283456495|ref|YP_003361059.1|
Sequence length 847
Comment CRISPR-associated helicase Cas3 [Bifidobacterium dentium Bd1]
Sequence
MYDERILQKLCYTEDSNSVHCRSKEHRMNSKQLLARKDATGAVQTLRDHLHGAGKLARDF
EEEFSAISYTAALLHDLGKASEDFQEYLLSAKGHRGSVIHAWQGAFLVDDACALSSEKSA
AEQAVQEITREILELAIAKHHGELPDCLDVDGFSTFFDGLATDRKNEIRFSYQEVKDRIS
YLDLDIAGNYDKSIRDVEHFMQKFNMGGITNSDSFYFYLGLFAKYVYSRLIDADRLDAAC
FEERRTYRSKSIDWSSLIDRFEKNIRKFDHTSEINKIRNQISEQCRLEGKRSTGIYRLAV
PTGGGKTLASLNFALHHAIETNKRRIIYVIPYLSITSQTVKVFREILELDEDDTETLLEH
YSSAGGRKDDDTFTNTQSEFDQEEDDEQNAKRKLATERWDSQIIVTTMVRFLETVMSSKS
GDLRRFHNMADSIIIFDEIQSLPTNAINLFNEVVSFLSKILGSTIVLCSATQPLLERTSR
KNLLLADCPNLIDDSQEYFEKLRRTCVVAATEMKNCDELAEIIYEKAKENGNCLAIVNLK
SEARIIYQCLKTLNGDNHFKIIHLSTSMCGQHRTDKLELVRQLTSIDKGKPVICISTQLI
EAGVDVSFSCVIRAMAGLDSILQAAGRCNRNGESKSPKKVYVFGIKDEKGLSYLPDIKMG
KEITERMVREHPDEDLLSNEMLLEYYQLFFEGIQSGNDNGFGIMDYPIPGKQNLYAYDLL
SCNRAARGQYVNSSGTQYLKVYAQAFKTVGNRFRVIPNQNHNVVVPYGRVEKHMERLSRG
NLREQFAALRQLQDYSVSLFDNEYRSLDERGAITLENEDFGIYMLNKDYYKEEYGVVTET
EMSLLYI
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Identical sequences D2Q5M0
gi|283456495|ref|YP_003361059.1| 401473.BDP_1643

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