SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|294673832|ref|YP_003574448.1| from Prevotella ruminicola 23

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294673832|ref|YP_003574448.1|
Domain Number 1 Region: 365-443
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.0000000526
Family PDI-like 0.054
Further Details:      
 
Weak hits

Sequence:  gi|294673832|ref|YP_003574448.1|
Domain Number - Region: 116-141
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 0.0391
Family Glucoamylase 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294673832|ref|YP_003574448.1|
Sequence length 456
Comment hypothetical protein PRU_1122 [Prevotella ruminicola 23]
Sequence
MNSRLFVAVIVSTVTLTFNALRMNQVQWALHQFLQSLGIKVPYSVVRKLLDTPVGTTLRG
ISDSLDSLHIDNSVYQLPKEYLKELDYPYLMVLSNSKEGFAIITNDNEKEKALPKWDGVV
LAAKKTNATPIYNYVWLRDAIDNICNSHLELIFSAIVVAFAMLLQPNLFTMSHVFLSLIG
IWVSISLLRKDYSESNSTGRYCKIGRFIDCQSVLDSKGSRFWRFLRLSDLGFFFFSTQLF
LVLISNNGWQTFSLILLIIGCCFTVYSVVYQITVIHKVCLYCMSVNLITWLDTILITTNA
PLPKVGTPYIFIFSVLISYLIWSFTVRNVSLSRQTYSLRNRLSVLYRRGLFEWLLSQERE
LEEISDNYAECSGINGTDTITVFVHPQCKKCKTVEAAISQLSQIARVKIVSLAAKAPEVR
LYCERNQIVRTPTIVVDGHELPEVYDIGDLKYILKS
Download sequence
Identical sequences D5ES44
gi|294673832|ref|YP_003574448.1| WP_013063594.1.33358 WP_013063594.1.49956

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]