SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|170290194|ref|YP_001737010.1| from Candidatus Korarchaeum cryptofilum OPF8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|170290194|ref|YP_001737010.1|
Domain Number 1 Region: 110-150,177-378
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.31e-21
Family Integrin alpha N-terminal domain 0.022
Further Details:      
 
Weak hits

Sequence:  gi|170290194|ref|YP_001737010.1|
Domain Number - Region: 21-98,158-196
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.000397
Family WD40-repeat 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|170290194|ref|YP_001737010.1|
Sequence length 799
Comment hypothetical protein Kcr_0574 [Candidatus Korarchaeum cryptofilum OPF8]
Sequence
MRGGAKVLLFKQGLPGDPVAIVPVGSLIVAASSDGTITYMDSKAALRTLSICSGRLVKMA
HGTTSRGGAIYAICYSREKQVASLAIIMDSGSFRFYEQPVPSRFNSSGTGFIYSSMKRDF
PAAVEPPAPLVADINGDGYDEALAYLDGHLLYFESSLSDPKQYQVDAVLGLSVEGRSVFV
STASGIFIWGPDGLKPYSNIGCSSLPIPVDFDGDGKLEVACRRGDIVQVVKGDSIIFRAE
GGATDPAVYDLNGDKRPELIYILNDGTLVARSPSLSWRAKVEAPYNRPVVADVDGDLRPE
VIVAAGQYVYCFSNDGKEKWRVSLREFSGWVSGGEVDFQRYMRFEAKTQPILLDYDGDGL
LEILVGIGAYLEQGRVALLDEMGKNEAPKVEIISPSNYTKVGKYVKITFKVTDESSRLRA
RILSSTELWSGTVESGSITSVEVPSFENIVIEASDGILTTSSKLYLKVDTQPPKMVIEPS
NMSKITEGTNITVRIIAPIDEYAFLTVYHGTPGNWIKIIERRVWKTSVVSINVTPIVEMV
SGYRLFKFHLVDKYGNVEDVVMRYRIERSKEERVNSSVSLILSVNNLISKEARVNCTLIG
LDRASLYYGDGADWKLIKEVSGNESILWDVSGLKDGKYILKLESGSVSSLKEVTIDNTPP
SIKIEADKRIPVGGTAIVRVEGDFERLYWDLDGDGIFETAGPPLARIEGKEPGRIRINVM
GVDGANNSATAGVEIEVFEANEKIEATEVESSNASISNPQISYASIIRPELLALALLLVA
IVMMKSSRRKKSSNPWKKR
Download sequence
Identical sequences B1L4E8
374847.Kcr_0574 gi|170290194|ref|YP_001737010.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]