SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|158335660|ref|YP_001516832.1| from Acaryochloris marina MBIC11017

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158335660|ref|YP_001516832.1|
Domain Number 1 Region: 27-221,248-351,382-411
Classification Level Classification E-value
Superfamily Pectin lyase-like 7.85e-39
Family Filamentous hemagglutinin FhaB, secretion domain 0.017
Further Details:      
 
Domain Number 2 Region: 534-637
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000107
Family Filamentous hemagglutinin FhaB, secretion domain 0.048
Further Details:      
 
Domain Number 3 Region: 457-518
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000753
Family P22 tailspike protein 0.087
Further Details:      
 
Weak hits

Sequence:  gi|158335660|ref|YP_001516832.1|
Domain Number - Region: 632-734
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.027
Family Filamentous hemagglutinin FhaB, secretion domain 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158335660|ref|YP_001516832.1|
Sequence length 901
Comment hemagglutination activity domain-containing protein [Acaryochloris marina MBIC11017]
Sequence
MQLNSFLKSRHLLLWQCLALILLELLACMEAVAQIVPDATLPSDSVVDIQGNLQRITGGT
TVGNNLFHSFKEFSVSTDSVAIFDHDLSIGNVITRITGRNVSTIDGLITGNGTANLFLIN
PNGLIFGANGQIDIGGSFIASTADSLHFGDGSIFSAVDHQTPTLLTISTPVGLQFGESPR
TVINRSQATQIGQNGMESLVGLQVKPGKTLALVGGDVNVEGGYLTSAGGTIDLSGVGATL
EGRQLGSNAQTSGGRIEVGAVGANSYVQISQSSENVNTFSLNYDGVEKFQNILFSNLAVL
DASGDGGGEIQIRGQQVKLNEGSLIQSNTLGNKPGGTITISATDSLQVLGNTLTNGPLDT
RLAAAGILTPRLTNITSSSFSEGQAGNIEIEAGKVIVEQGAEIAAFSFGLGRGGDVSIRV
AGFVDISGQSIPLGFVPERFFPFGFDVPGFSDASFRSITLSSNISAASIGSGRAGNILID
AKKLIIGDGGLVTAGPLFSGNGGSIVVNASDSVEVSGTSRYSLPPNLAISRSRLSVASFG
SGDTQSLAIKTKRLIVRDGGAVEAASFATGASGSLSIEASEVIDISGFSFSPRDGLLQSA
VSASSFGSSDAGDLSLITDQLILRNGAELAVNSINAGDAGNLEVIANSIYLDSMGEIIAS
TASGKGGNILLRVQENLLLRNKSLISTNADGTGEGGNINIGAKFIIAPPIENSDIVANAV
TGRGGKIQIQTQGIFGLVPREQLSSTSDITASSEFGVSGTIEIQDPEVDPSDGLADLPET
IEVNPPITQGCRPGQTLGGSTFVHVGRGGTPLAPTQLQTAPSIWHDLRGFPILNEKSFSE
QNHLKSDSSPEMDSPNQPPQSVPISHIEEAKGWTRNKQGRIVLTNNIKHTAHNSGQPSVT
C
Download sequence
Identical sequences B0C5E2
WP_012162978.1.67183 329726.AM1_2510 gi|158335660|ref|YP_001516832.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]