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Domain assignment for gi|158339001|ref|YP_001520178.1| from Acaryochloris marina MBIC11017

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|158339001|ref|YP_001520178.1|
Domain Number 1 Region: 231-426
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.01e-46
Family Ribonuclease PH domain 1-like 0.00000571
Further Details:      
 
Domain Number 2 Region: 73-162
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.67e-27
Family Ribonuclease PH domain 2-like 0.0016
Further Details:      
 
Domain Number 3 Region: 389-487
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.17e-27
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 4 Region: 494-579
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 4.13e-23
Family Eukaryotic type KH-domain (KH-domain type I) 0.0026
Further Details:      
 
Domain Number 5 Region: 1-72
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.87e-20
Family Ribonuclease PH domain 1-like 0.00024
Further Details:      
 
Domain Number 6 Region: 554-629
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.34e-17
Family Cold shock DNA-binding domain-like 0.00058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158339001|ref|YP_001520178.1|
Sequence length 646
Comment polynucleotide phosphorylase/polyadenylase [Acaryochloris marina MBIC11017]
Sequence
MPGGFLRREGRPPEKATLTCRLIDRPMRPLFPNWLRDDLQIVATTISMDEQVPPDVLAVT
GASVATLLAKIPFKGPMAAVRVGLVGDDFIINPTYEEISEGELDLVVAGSPDGVIMVEAG
ANEVAEQDMIEAIDFGYEVVCDLIKAQKELIAELGIEQVEEAAPETDPTLENFVQERVTD
PVKDVLARFEKDKNVRDAALDEIKESVKVAIDELPETDPVQVAAVENPKAIGKVFKSITK
TLMRRQVVEDKVRVDGRKLDEVRPISCNVGVLPQRVHGSGLFNRGLTQVLSIATLGTPGD
AQEMDDLHPDSQKRYLHHYNFPPYSVGETRPMRSPGRREVGHGALAERALLPMLPSKEEF
PYVLRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPLAKPVSGAAMGLIKEGEEVRVLTDI
QGIEDFLGDMDFKVAGTADGITALQMDMKITGLSMKVIAEAIHQAKPARLHILDKMLATI
DSPRETMSPYAPRLLTIKIDPEQIGMIIGPGGKTIKGITEETGAKIDIEDDGRVTISAVD
EKAASRARQIIAGMTRKLAAGDVFLGKVTRIIPIGAFVEIAPSKEGMIHISQLADYRVGK
VEDEVTVGDEVVVKIRELDNRGRINLTRLGIHPEEAAAARAGGSES
Download sequence
Identical sequences 329726.AM1_5920 gi|158339001|ref|YP_001520178.1|

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