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Domain assignment for gi|269797673|ref|YP_003311573.1| from Veillonella parvula DSM 2008

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|269797673|ref|YP_003311573.1|
Domain Number 1 Region: 7-381
Classification Level Classification E-value
Superfamily PLP-dependent transferases 2.79e-82
Family GABA-aminotransferase-like 0.053
Further Details:      
 
Domain Number 2 Region: 341-492
Classification Level Classification E-value
Superfamily Ornithine decarboxylase C-terminal domain 6.8e-24
Family Ornithine decarboxylase C-terminal domain 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|269797673|ref|YP_003311573.1|
Sequence length 493
Comment Orn/Lys/Arg decarboxylase major region [Veillonella parvula DSM 2008]
Sequence
MSNQEKMPFVEALESYKEQHFVPFHTPGHKIGVEAPQLLKNWMGPALPYDLGVMYALDDL
HEPERELKEAQDLTAELYGAEYCWFSINGTTALIEAMIMGTVGPDETIIIPREAHRSVIS
GLVLSGAKPVYMDCNFDERWGIPLGVSLVNAIKTMEAHPEAKAILLVYPNYYGIGVDIVN
IVKEAHKRGLIVLVDEAHGPHLPFSESLPIEAIEAGADLVAQSTHKSVGSLTQTSWLLGQ
GKKIDKRRITQMHQMLQSTSPNYIFLASLDMARHQLATAGNDLVSRAVELSVYLREELNK
ISGIATMEYTDIQERVINYDCTKVLIDAKELGLTGVAFERMLREHHIEVELVQAHHVLVL
ITIGDTKESVTALIKAVQAVSEKVLRTFKEFNNTEEEQLQDISKDSALLPAPIVRVTPRN
AMYANREQVPLKEALHRIAGETIAYYPPGIPCVAVGEEISDSVLQYIENRKALGYVPNGA
DDMTLETIWVLQE
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Identical sequences D1BLN6
479436.Vpar_0610 gi|269797673|ref|YP_003311573.1| WP_012864127.1.68909

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