SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|269798397|ref|YP_003312297.1| from Veillonella parvula DSM 2008

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|269798397|ref|YP_003312297.1|
Domain Number 1 Region: 174-256
Classification Level Classification E-value
Superfamily TolA/TonB C-terminal domain 0.0000000249
Family TolA 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|269798397|ref|YP_003312297.1|
Sequence length 267
Comment TonB family protein [Veillonella parvula DSM 2008]
Sequence
MGLGISWKKAAIISAVVHLIALFIAVIFFVVVPAIQEMDTYEIDLTQSVLDDGGSGHAGG
GGGNRADLFPKPLSADEVAARTKAVVANVEPSTATDIPDAVDVAAKASENKGNTSGDNSA
VGGTGPGSGGGSGGGHGTGEGTGIGDGRGHGTGTGDGTGEGDGHGTGKAAFNVEGFYAAV
DSQKQIPYAAIKRKMNVDVTINVMAKLDTNGNLIDVYPTSGGDEIFVEAALDAVRRATPY
PNETGDIQPVEVPVHFVVQADGEDEEE
Download sequence
Identical sequences D1BNR0
WP_012864670.1.68909 WP_012864670.1.96711 479436.Vpar_1339 gi|269798397|ref|YP_003312297.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]