SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|284044509|ref|YP_003394849.1| from Conexibacter woesei DSM 14684

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|284044509|ref|YP_003394849.1|
Domain Number 1 Region: 8-66
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 9.85e-21
Family GntR-like transcriptional regulators 0.0098
Further Details:      
 
Domain Number 2 Region: 177-281
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 0.00000000000011
Family GntR ligand-binding domain-like 0.0083
Further Details:      
 
Domain Number 3 Region: 101-145
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 0.0000523
Family GntR ligand-binding domain-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|284044509|ref|YP_003394849.1|
Sequence length 285
Comment GntR family transcriptional regulator [Conexibacter woesei DSM 14684]
Sequence
MAFHEVVRSPAYEQVAHQLREAILDGVLGPGDELPAERELCAQFGVSRTTVREALRALQA
QGLAVAAGPTAPLRVAAAETLSLGPLRTSLVHLLRLGRVPLDDLVEVRCALEAAAVAGAA
ARRDPAQLAEARAALDAMRAVGSEHAHDAAPVGGEHTRDAAHARDARIGVAAPARGEHAH
AAARDGSAPPGDVVDRFEAADVRFHLALVAASGNEAIQLMMLAVRDSISAHLHDALRALP
EPRRAIDRLVRQHEAILAAVEAGDVRDAEHLLRDHVMGFYRGISA
Download sequence
Identical sequences D3FCW2
gi|284044509|ref|YP_003394849.1| WP_012934525.1.44340

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]