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Domain assignment for gi|428778288|ref|YP_007170075.1| from Halothece sp. PCC 7418

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428778288|ref|YP_007170075.1|
Domain Number 1 Region: 252-443
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 2.49e-42
Family Multidrug efflux transporter AcrB transmembrane domain 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428778288|ref|YP_007170075.1|
Sequence length 468
Comment protein-export membrane protein SecD [Halothece sp. PCC 7418]
Sequence
MQQQRTTIALIFFLIIAALVVLVQLSVPLGLDLRGGAQLTIQVKPTEEIQQITPERLNAV
KRVIQNRVNGLGVSEPIVQTVGGDQISVQLPGVSDPAQAERVLGGTARLEFRAQKQGTEQ
AFQSAFLQRQQLRTQLEELRQNPEENAEEIEETTAELNAVNEEIAQSFAPANLTGKSLQD
ARAQPLQTGDNWQVAIRFDQEGATQFAELTANIAGTGRGLGIFLDDVLVSAPTVGPEYAD
NGITGGSAVITGGFSIQEAQDLAIQLRGGALPLPVEIVENRTVGATLGQESIERSIYAAV
SGLILVLVFMGVYYRLPGLIANLALSIYALLTFSAYVLIGVTLTLPGIAGFILSIGMAVD
ANVLIFERTREELRAGKTLYRSVESGFYRAFSSILDSNVTTLIACAALFWLGSGLVKGFA
VTLAIGVLVSLFTALSCTRTFLLTAVLGFPNVRKKPELFCPNLVVSAK
Download sequence
Identical sequences K9YFX3
gi|428778288|ref|YP_007170075.1| WP_015227732.1.10129

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