SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|182678120|ref|YP_001832266.1| from Beijerinckia indica subsp. indica ATCC 9039

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|182678120|ref|YP_001832266.1|
Domain Number 1 Region: 544-732
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.75e-28
Family Nitrogenase iron protein-like 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|182678120|ref|YP_001832266.1|
Sequence length 745
Comment lipopolysaccharide biosynthesis protein [Beijerinckia indica subsp. indica ATCC 9039]
Sequence
MRVDTSGVAEARTTFISMYDHFRQVMHRQLPLAGMVLGCCLALGLLYYLTTPSTFTATGA
LLIDPHQAPSSQQQSTPGDLALDTSSVQTQVEVLKSETITRAVIRKLNLTKDPEFVRPRG
MIGATASFLTGLFGSSRTETPEQRERAVIEKFNQARSISRQDLTYVMQVSFRSEDPVKAA
QIVNALAEAYVDDQLEAKYQATRRASLWLQDRIKDLQSQALTAERAVADFKEKNNIVDAG
GRLMNDQQLAEINSQLVLTRAVTNETKARYDRIQAMMAQEIPDASVADSLNNPVIIHLRS
QYLELAQREAIWAQRYGPDHQATVNLRTQMRELTNSIRDEMRKIADSYKNDYEIARMREE
SIKQSLDEAVSQAQTASEAQIQLRDLQRNAETTRTFYDNFLRRYMEAIQQQSFPISEARL
ISPATPPLKKSAPHGSIVGLVSLFSGSILAIGAAYLREMSDRVLRTSTQVEDVLHVNCLA
VLPALQTRAEKILKGRKQKALPEKRDFDRLSLLRYAVDAPFSRYAEAIRSLKIAADLNGV
LNTGKVIGITSTLPNEGKSTIAANLAHLIADAGGRVILVDADLRCPSLSQAYAPQRPGIA
EVVSGGQSLDTTILTLPASNLKFLPAGATTKLPHTNEILASSAVKIVFETLRANYDYIIT
DLSPVAPIVDVRTTGHIIDSYIYTVEWGHTRIDIIRRALSDAPNVYEHLLGVALNKVDTA
AQNRYERYHGNHYYRKYYAKYGYVE
Download sequence
Identical sequences B2IJ14
gi|182678120|ref|YP_001832266.1| WP_012384134.1.21334 395963.Bind_1135

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]