SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|165933225|ref|YP_001650014.1| from Rickettsia rickettsii str. Iowa

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|165933225|ref|YP_001650014.1|
Domain Number 1 Region: 596-771
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.79e-55
Family ATP-dependent protease Lon (La), catalytic domain 0.00000197
Further Details:      
 
Domain Number 2 Region: 314-587
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 7.65e-47
Family Extended AAA-ATPase domain 0.00033
Further Details:      
 
Domain Number 3 Region: 6-205
Classification Level Classification E-value
Superfamily PUA domain-like 1.02e-23
Family LON domain-like 0.00038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|165933225|ref|YP_001650014.1|
Sequence length 779
Comment ATP-dependent endopeptidase Lon [Rickettsia rickettsii str. Iowa]
Sequence
MMHKKSLPLMALRDMVVFPGVIAPIFVGRPKSLQALSHTTISEEDNSKYILVTLQKKFDQ
ENPSTHELYNTAILAKIIQIVKLPNNTAKILIEAVARVKLSNIKGDEAFEANYEIIPDEE
IFDVNNMRSLVDNAVQLFSKYAINDKKVNAEIIETINKAISNSTNFIDIINILASHLITS
LEAKQHLLEETSPFKRITTVISTLTSNIVNSETEQALQQRVRKQIEKTQRDYYLHEQMKA
IQKELDEDKSELADIEKKIKSLKLSKEAKEKAEAELKKLRTMNQMSAESGVTRNYLETLL
SLPWGKYDNSKIDINQAEKILNRDHFGLEKVKERIIEYLAVLQRSSKIRGPILCLIGPPG
VGKTSLVKSIAEGMGRKYTKLALGGVRDEAEIRGHRKTYLGSMPGKILGQLKKVKTSNPV
MLLDEIDKMSSDFRGDPASALLEVLDPEQNSHFVDHYLEVEYDLSNVIFIATANSHDLPR
ALSDRMEKIYISGYVEETKLQIARNYLVPKQFKMHKIKKDEITISEMALLDLIRYYTKES
GVRALEREIGALTRKALKQILADKSVKHIAIDSNHLEEFLGAKKYNFGLAEKEDQIGSTT
GLAYTEVGGELLTIEALAFPGKGEIKTTGKLGDVMKESAMAAYSCFRSRATNFGLKYDNY
KDFDIHIHVPAGAIPKDGPSAGCALFTTIVSLMTKIPVHRTVAMTGEITLRGNVLPIGGL
KEKLLAASRGGIKTVLIPEENVKDLQDIPPNIKESLEIISVSNIDQVLKHALVGTPINK
Download sequence
Identical sequences B0BXN2
452659.RrIowa_0750 gi|165933225|ref|YP_001650014.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]