SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSAMXP00000003794 from Astyanax mexicanus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSAMXP00000003794
Domain Number 1 Region: 891-1062
Classification Level Classification E-value
Superfamily Fibronectin type III 1.34e-33
Family Fibronectin type III 0.0022
Further Details:      
 
Domain Number 2 Region: 379-522
Classification Level Classification E-value
Superfamily Fibronectin type III 1.59e-28
Family Fibronectin type III 0.000041
Further Details:      
 
Domain Number 3 Region: 612-773
Classification Level Classification E-value
Superfamily Fibronectin type III 8.68e-27
Family Fibronectin type III 0.00012
Further Details:      
 
Domain Number 4 Region: 766-868
Classification Level Classification E-value
Superfamily Fibronectin type III 1.75e-17
Family Fibronectin type III 0.0002
Further Details:      
 
Domain Number 5 Region: 264-388
Classification Level Classification E-value
Superfamily Fibronectin type III 2.06e-17
Family Fibronectin type III 0.00013
Further Details:      
 
Domain Number 6 Region: 1061-1156
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000227
Family Fibronectin type III 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSAMXP00000003794   Gene: ENSAMXG00000003573   Transcript: ENSAMXT00000003794
Sequence length 1208
Comment pep:known_by_projection scaffold:AstMex102:KB871728.1:259542:330052:1 gene:ENSAMXG00000003573 transcript:ENSAMXT00000003794 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MYVTMMMTDQMLELPPLLNGEVPVMHHMINGDASQQVIVVQVNPGETFTIRREDGTLQCI
QGPAEVPMMSPNGSIPPIHVPPGYISQVLEDTTGVRRVVVTPHSECYPPSYSPAISPTHH
LPPPYMTHPHFIPTSHTAYYPPASPGDVPPHQYYQHRLPPIYPEEIIPLYNMSTFLGREE
YCKPQPKKPKERPTERQSLSRVSTPPSSSYKNGSACNSTPNGYSKNHSGTAATGGGGGSP
GNKRTERRARGSPKHTESDQQDPVLDTRRDQDVPSGMDKPQVCKVQAHSALVSWSRATQV
GASGRGQTDGAPQSCSYELLLADKSCDGKYKVVYSGEELQYTLTDLRPATDYHVRVSAVC
NSVKGPHSEVRAFTTHSAPPETPLPPRLSHRTKSSLTLQWKPPVDNGSKITSYILEWDEG
KKNSVFRECYFGHQRHFKVMRLCPAVGYTFRVAALNDIGPSGFSPEVVFHTTGSLPQMPL
APRLLRAGTSWVALEWTRPSGCSPDEALTYTLEMQDDSKLITHHPQLSDTECMCTDQRMR
TCTDLAVHIHITCLRSKSTLLRVLNCVLKKRAVKSPPFYLMRGGRVEHSSQERKMDDHKP
SNQAELLEFSALTFSLFCCTEGSQWEVVYRGPLREHVCKDLNASTRYTVRLSAIGSGGHS
QYVDSLHVCTLSMPPGTCRPITVQGSVKHREVNLQWEGPVCDVENESLVYSVEMSGVEEE
ANPMQVYNGTHTECTVGSLLPGATYRFRVRAANDAGYGPYTEFVEVTTAAGPPGQCVVPV
INLTSHTCAVVSWETDESSGADISGYQLDWGRDQDSLEMIYNGTETFCEISNLEAAASYC
CRLQATNQAGAGPYSDLGWCRTPAAAPNAVVSLYLQESVSLPADEEPFSPSTCLALAWDE
PNCNGQEITCYTIAMGETLITAGNATCHVIRNLQPDSEYSVQVRAENSVGAGPFGPSLQV
RTKPLPPSPPKLECAATGPQSLKLRWGDSNSRGPITDDTTYVLQMEDRNQRFVPIYRGPS
HTFKVQRLSESSRYTFRIQAVSEAGEGPFSDTHTFTTTKSVPPTLKAPRVAQLEGNACEV
TWESVPPMRGDRITYVLQVLGGKESEYRQVYKGEDTSYQLFGLQWNTDYRLRVFVCRRCS
DTSQELCGPFSPSTHFSPRRTNTAVALEPGSVSTSTPKALTDEQFASLIVLGVAGASIII
AYLLQLLI
Download sequence
Identical sequences W5K883
ENSAMXP00000003794

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]