SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSAMXP00000018216 from Astyanax mexicanus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSAMXP00000018216
Domain Number 1 Region: 428-602
Classification Level Classification E-value
Superfamily p53-like transcription factors 1.62e-70
Family Rel/Dorsal transcription factors, DNA-binding domain 0.000000176
Further Details:      
 
Domain Number 2 Region: 604-703
Classification Level Classification E-value
Superfamily E set domains 6.11e-24
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.00042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSAMXP00000018216   Gene: ENSAMXG00000017687   Transcript: ENSAMXT00000018216
Sequence length 1010
Comment pep:known_by_projection scaffold:AstMex102:KB871579.1:7770843:7790630:1 gene:ENSAMXG00000017687 transcript:ENSAMXT00000018216 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTTANYGGSEELDFRLVFGEDTQLTSLGHTDARADNGAACYPMPVFQDQPIVQPPPGPQG
GQLPSSCAAPSSSYSSVDSPSRVFDCPSIQITSIPASFQHDPLNVIQDGGVLEQQGASAP
LVSRDQLYLPLDASYRDALCPSPCSSLSSRSWLSDASSCESFSHIYDDVDAELNEAASRV
RLGSPLVSPLGSPLPSPLTSPQASPQVSPMVSPFGSPSCAYAEDPWFRYQQQQLQQRLYT
RSLSPHQSPYQSPRASVTEETWLSPQPRASSPSRPSSRPTSPCGKRPYSRADAVPGSSSP
HLSPSPSPSHSPRGSVTEETWLGSPGAMAASLQACSSEMDIPTKTRRTYHTQEPTYLLLG
QGDSGLEDYSHITSPSLDSSIEGSLPTLKKEDIGEQYLSVPPAFAWGKPKQTQTPLFRST
SLPSLESPLPSQFGQFELKLEIQPKPHHRAHYETEGSRGAIKSPCGRHPVVKLIGYSEKQ
VSVQMFIGTADDRHVRPHPFYQVHRITGKTVATPSQEMIIGGTKILEIPLLPENSMSASI
DCAGILKLRNSDIELRKGETDIGRKNTRVRIVFRVHIPQANGKMLSLQAASIPIECSQRS
AQELPQIDNFSPTCGSVIGGQEMLITGPNITPESKVIFLEKGPDGKTQWEVDARTVCEKS
KDMSIVVKIPPYHKRILASSTQVQFYISNGKRKRSPTQRFTYVTAVQVKQEFDSVGENAV
CDPAQFIGAEAQLPSDQVHPLEQWLYSGDPVCVPSSTQLSYSPGGSSYLNRHYPPDGNLS
AGPELHSIFHSPSLDFSKPSFQSPQQNISYNGQPNVHSDIVSGGKSSPLMSNQAKSLLVI
GHHSSPGGAHSLNPFPSPRYNEGYISPTSGSNQPDLSSLNHHSSSNDHVDLQGLSKSSAC
LESPVSQQPLAYTVVPSTSALTLIDTNSTKTSPISLPESGASGPKTSTVPKVSQDHKDGT
RPNIKEEPEEKELTFQSLGLQDITLDDVSEIIVRDLFQSPDPAGDSYSLP
Download sequence
Identical sequences W5LEF4
XP_007228245.1.101067 ENSAMXP00000018216

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]