SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for gi|291302060|ref|YP_003513338.1| from Stackebrandtia nassauensis DSM 44728

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|291302060|ref|YP_003513338.1|
Domain Number 1 Region: 92-230
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 1.18e-19
Family GntR ligand-binding domain-like 0.0075
Further Details:      
Domain Number 2 Region: 22-110
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 8.47e-18
Family GntR-like transcriptional regulators 0.01
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|291302060|ref|YP_003513338.1|
Sequence length 262
Comment GntR family transcriptional regulator [Stackebrandtia nassauensis DSM 44728]
Download sequence
Identical sequences D3Q6K2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]