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Domain assignment for Phvulv091014149m|PACid:23544248 from Phaseolus vulgaris v186

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Phvulv091014149m|PACid:23544248
Domain Number 1 Region: 117-199
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 2.35e-31
Family Sigma2 domain of RNA polymerase sigma factors 0.00033
Further Details:      
 
Domain Number 2 Region: 267-356
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 1.74e-20
Family Sigma4 domain 0.0017
Further Details:      
 
Domain Number 3 Region: 206-278
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000000392
Family Sigma3 domain 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Phvulv091014149m|PACid:23544248
Sequence length 366
Sequence
MLIPNMSLSSLPSFPMHHSLQPTKFATNSDTSTEAVTLVNASVQTEVSVIGNNENGSIVG
FRKSWYLSSREEAELCLDLRVSSDKTQTPQQGAKSEVAKLITKGLEEHSAIPIMSLLSLD
KALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQEGTVGLLRGAEKFEPERGYK
LSTYVYWWIKQAMIKAIARKSRLVRLPSGKSEMVAKVAQANNILSSRLRRKPTYDETAEV
LNVKASTIRLVSEKSRKPISLDKVVTDCGHMTLQEIIPGPEDMTPEKMVKRQLMKQEVMK
LLNTLSKREAEIVTLYYGLNGETPLTFKEIGGMMQLSRERIRQINGIALSKLRQTSIIDN
LKFYLV
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Identical sequences V7BSA6
XP_007148893.1.22112 Phvulv091014149m|PACid:23544248

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