SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|186685362|ref|YP_001868558.1| from Nostoc punctiforme PCC 73102

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|186685362|ref|YP_001868558.1|
Domain Number 1 Region: 22-229
Classification Level Classification E-value
Superfamily ARM repeat 9.98e-23
Family PBS lyase HEAT-like repeat 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|186685362|ref|YP_001868558.1|
Sequence length 280
Comment HEAT repeat-containing PBS lyase [Nostoc punctiforme PCC 73102]
Sequence
MNSSPQKFEDLSATGDVDGGSLTVEQAIANLESEDLGLRFYAAWWLGRFRIGEPAAVTGL
IKALEDEADRTPEGGYPLRRNAARALGKLGDRQAVSPLIACLDCSDFYVREAAAQSLEML
GDPVCIPALIKLLAVGLQAEQLVSQQPDLSQPYEAILEALGTLRATEFIPLVKPFLEHPI
ELVQYAAARAMYQLTEEPAYGERLVKALAGERLQLRRAVLADLGAIGYLPAADAIAQTLA
ENSLKLISLKGLLEHQVNYVTPSTLSEGAIKVINLMDSLL
Download sequence
Identical sequences B2J4C5
gi|186685362|ref|YP_001868558.1| 63737.Npun_F5294 WP_012411566.1.44837

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]