SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Achn064241 from Actinidia chinensis Hongyang

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Achn064241
Domain Number 1 Region: 28-155
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 2.36e-25
Family alpha-D-mannose-specific plant lectins 0.0023
Further Details:      
 
Weak hits

Sequence:  Achn064241
Domain Number - Region: 298-347
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0118
Family Anti-platelet protein 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Achn064241
Sequence length 572
Sequence
MGKPSTLVKDNATESSYQTPCSDTYVTEPQLVWSANRDSPVRENAILRFTQNGDLILEND
DGSFVWSTNTGGKSVSGLNLTEEGNLVLYDKNNEKVWQSFDQPTDSLVPGQKLVLGNKLT
ASASASNWSRGLFSLAVRYAAGLVAYIESDPPQYYFEEYFNWTTTPSIQFVNGNLHWLSI
PNASAGQLQFMKLESDGHLKVYEWKELYYNWMVVADLLASNIGVCGYPLACGKYGICSDG
QCYCPEDANRYETRFFRQTNYRIPNQGCTPITAISCDHSQYHSLMELQNTAYFSYQRLSY
NENPKLDNKTDLEGCKKACLNNCSCRVAQFIHSWNNFEGRGCLLISEVFSLVDTGRNNEN
ISVFLKVQNPQKKSRRVTIILGSSLGAFFGVFLMAALCFFLYGREKEAKELYEIYLDQVP
GMAVRFSYEDLTTMTNDFSTKLGEGGFGKNLDRSQPEEDMHLLSLLKRKAEEGRLEDIID
EDNDEMRLHEAEVIKMMRVAMWCLQSDFPRRPSMSAVAKVLEGLLDVETNLDYNFTTPRR
IADAAHKEDDALGVATQLLPSALSGPRSVKNW
Download sequence
Identical sequences Achn064241

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]