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Domain assignment for Achn350471 from Actinidia chinensis Hongyang

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Achn350471
Domain Number 1 Region: 220-310,379-410
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.74e-20
Family Canonical RBD 0.002
Further Details:      
 
Domain Number 2 Region: 368-410,437-496
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 7.14e-17
Family Canonical RBD 0.0052
Further Details:      
 
Domain Number 3 Region: 322-358
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.0000000044
Family Ran binding protein zinc finger-like 0.002
Further Details:      
 
Weak hits

Sequence:  Achn350471
Domain Number - Region: 560-616
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 0.0032
Family alpha-D-mannose-specific plant lectins 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Achn350471
Sequence length 984
Sequence
MHMIMVILHIAIRVDGSYDDRRFIDERLSRDNSYSRNAFHRDILGRENYPPPPADGLWTQ
IRRRSYEDEHSLGRDYRQHEKPYSDSHHEMDAFQEADRSRSSHQSREDSWERDYDYGRRS
YDSDYDRGIRRESSRRSRESRDRDRDKRCLSRERDRSPQRRHERSRSRGHDDRARSRSPR
SRSHGRSYREDSYDDDRHERSEKRRDRERQNEHYSVSASATVVVKGLSQKTTEEDLYQIL
AEWGPLCHVRVIKERNSGISRGFAFIDFPSVGAARAMMVKLGDDGLVVDGRKLFLEYSSK
PAGGAGGPSFGLDNALKSGHANHKSITLPSDWICTICGCINFARRTSCFQCNEPRTDDAP
PADMASSNPTPMGKKGEAGPNHVLVIRGLDEIADEAMLRYEFSKHAPIKARHFKLLLECC
ISFKCTEFSQVLELQDLRMVRDKFTHVSRGFAFVHFHTVEDATKALESTNGTMLEKNGQI
LRVTYAKSILGPRSGPSGSSQSSSLAAAAIEAATFSQQYDAVGWAPKEYNPDDKPSTGGQ
EQGGGGVATPKDASAPQSGFVWDEASGYYYDATSGFYYDGNTGLYYDGNNGIWYSYDHRT
QQYAPCSDQNDNKTSGEQTESSKASEGSNNRKVVISAPAATITSNEKAASLPDAVQAAAN
AAIAAEKKGKEKLKEIRLASKGSILANKKKMSNALTMWKQRSHDGQAPRVAIDDNQPSAS
AEDRSNSVGMPAKSRYKMETVTMKDNIAMSSGFTTATITVQSVVGASSSSSAAATGYTAG
SSSTNADAPTTVMAFRTDASALGSYTPPVAVKRRFSEMPLQSASTLKELPQTTYRDRAAE
RRSLYGSSSSIGDNVSDIGIGDSNRDSAFKKGLVDSMPFPPGVGGGRGFGDANIQNYEPI
SADRAIDESNVGNRMLRNMGWQEGLGLGKDGSGIVEPVQAKPMESRAGLGSRQKKLDPSL
DVQAGDSYRTLIQKKAIARFREMS
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Identical sequences Achn350471

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