SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Achn356781 from Actinidia chinensis Hongyang

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Achn356781
Domain Number 1 Region: 108-218
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 3.66e-28
Family alpha-D-mannose-specific plant lectins 0.0031
Further Details:      
 
Weak hits

Sequence:  Achn356781
Domain Number - Region: 513-548
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.000285
Family Protein kinases, catalytic subunit 0.02
Further Details:      
 
Domain Number - Region: 394-456
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.000471
Family Pan module (APPLE domain) 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Achn356781
Sequence length 569
Sequence
MPSTKGQISMLAVCVRRSAYESLKSIDFRNMGIRFRTPTSIFCWLFLTLFYYFPLFSNAS
NNITQGQLIRDGEKIISSGKKFVLGFFSPGNSTQRYVGIWYYGIPEQSVWVANRGNPVSC
KNGILAFGNNGNLKVFDGNRKSVWSSNASSVPRNVTAVLLDTGNLVLYNSDSVGDPNNAL
WQSFDYPTDTYLPDMNVSMNVYEGENRVFTSWKSASDPSIGQYSMGVDPRGSPQIVIWDG
LHRHWRSGHWNGIIFTGIPTMRAIYLYGFKLFNKGNGSLYFTYTLSNTSDLMRFRLGWDG
REEQLRWDQGTSNWSIVQLQPDNECELYNKCGNFGKCSVEESTLCSCIEGFVPRYVDEWG
RGNWSGGCVRRTQLDCETNSRRNGVVGGGGGDVFVKVEGVKLPDFADLAVAQNSDDCEEN
CSKNCSCHAYAFASGINCMVWSGDLVDIHHFAEGGNDLYIRVADADLVLSKLWWTKNQVQ
TVDSRRSREFSTDFSGSNEIGIDRQQHAGQELPLLSFSYVAAATNNFSDKNKLGQGGFGP
VYKVPKGWRGDVHDFPVRLVMGRNDNIGY
Download sequence
Identical sequences Achn356781

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]