SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Achn367251 from Actinidia chinensis Hongyang

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Achn367251
Domain Number 1 Region: 1010-1299
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.97e-79
Family Protein kinases, catalytic subunit 0.00012
Further Details:      
 
Domain Number 2 Region: 180-390,642-677
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.22e-28
Family WD40-repeat 0.00000873
Further Details:      
 
Domain Number 3 Region: 614-743
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 8.38e-25
Family alpha-D-mannose-specific plant lectins 0.0036
Further Details:      
 
Domain Number 4 Region: 2-39
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.00000000000351
Family Protein kinases, catalytic subunit 0.0083
Further Details:      
 
Weak hits

Sequence:  Achn367251
Domain Number - Region: 882-917
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0228
Family Hairpin loop containing domain 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Achn367251
Sequence length 1347
Sequence
MKIEHRDIKTSNVLLDKDLNAKISDFGLAKLYDDDKTHISSQDSEELQSHDLADAVKQMK
EKRSRPWGMYLGAAVDRYDELGAFLHYCSGSYELMRLFGSVMETIHSDSAYGALSGIEST
RYKITPDQSTSLQKQVTFVSSNVQQRMNDSDTKGACPFTRMMARFHDMMEKIEDVDTLVN
YGLHDQIVSGIDWSIRSNRIVTVSHDRNSYVWNKEGPDWMPTLVILRLNRAALCVQWSPR
ENKFAVGSGAKTVCICYYEQENNWKAPSAKVVFAWTTASSLIQAQWVSKLIRKRHDSSVT
SVAWHPNNILLATTSTDGKCRVFSTFIKGVDTSLFICLVGIFNLFWDFLVLEQQIVQLDL
SFCWAFGVKWSPSGNALAYVGHNSMIYFVDEVGPAPSAQTVAFRDLPLRDVAIILIYIDI
YITHVRLQVLFVSERMVIGVGFDCNPMVFAADERGLWSFLRFLGERKRSPSGAKYGSQFS
EAFGKLYGQSKHGISNDVGEASRSRGGIHENCINIFLAITLFIFSAHLSNAQPVKYQVAN
LSTSWINNYPSIVTNSSDEKLSGFRLTPVLQGSNSSQFVSGFYCPYHETSCFFGILIFQK
RYEFDDSSSLINAPQLVWSANRDRPVKTNATLQLTSSGDLVLEDADGTLVWSTDSGGKSV
LRLQLTEFGNLVLFGRNNAMVWQSFDHPTDCLVLGQKLVSGKKLIASTSASDWSQGLFSL
SIRDYSLFGYVKTNPSLVYYESDILVDLNATFHEVYVKFENGSFNRYQIPPASTIQFMRL
DPDGHLKVYEWNGAVWNVVADVLTSDIGECGYPTKCDRYGICSNGQCGCPEEPNDETRNF
KQISYRQPDLGCSLVTPISCNQSQYHTLLELKNTSYFNLNSHYNNGLDETIELEDCKKAC
LRNCSCKAALFAYKLWDYNSRGGCLLLSEVLSLINNEGGINNVSVFLKVQKSQAEQYPSS
IGSSKKTLRGVAIIVGSGFGGFIIVFFLLASCYILFRWKSKSEEPDEFSVDQLLGMPTRF
SYKALKAMTNNFSNKLGEGGFGSVFLGTLNDGTEVAVKRLDGLSQIKKSFLAEVETIGSI
HHVNLVRLTGFCAEKSYMLLVYEYMSNGSLDKWIFQRHRELILGWQSRKKIIMDVAKGLA
YLHEECRQKIFHLDIKPQNILLDDKFDAKISDFGLSKLIDKDRSQVVTTLRGTPGYLAPE
WLSSIITEKVDVYSFGVVVLEILCGRKNLDSSQPEEDMHLLSLFKRKAEEGQLLDIVDKD
NDEMRLHGAEVVEMMRVAVWCLQNDFKRRPSMSVVVKVLEGSVDVEENLDYSFTNRAVPR
SIEAAGLQEYAVGEGTVLLPSTLSGPR
Download sequence
Identical sequences Achn367251

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]