SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Achn376371 from Actinidia chinensis Hongyang

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Achn376371
Domain Number 1 Region: 341-710
Classification Level Classification E-value
Superfamily RNI-like 4.79e-67
Family 28-residue LRR 0.038
Further Details:      
 
Domain Number 2 Region: 76-397
Classification Level Classification E-value
Superfamily RNI-like 1.33e-57
Family 28-residue LRR 0.06
Further Details:      
 
Domain Number 3 Region: 719-815
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.0000000000151
Family Protein kinases, catalytic subunit 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Achn376371
Sequence length 865
Sequence
MFPTPSVCFIAAMICSVLASVVPAKPSFEVQMEALEAFKKSITNDPFGVLVDWNDTKHHC
NWTGISCDNSTNHVISISLVDKQLEGEISPFLGNISTLQVLDLTLNSFTGHIPPQLGLCS
QLLVLILYYNSLSGPIPPDLGNLRNLQSIDLGNNFLNGSIPESISNCTSLLALGLIFNNL
TGSIPSNIEDLVNLQLFVAYGNSLVGSIPASIGRLEALQALDLSLNLLSGSLPPEIGNLS
NLESLQAFENLLIGRIPSELGHCRKLVAINIYRNQFTGSIPAQLGNLANLEILRLNYNRL
NSTIPLSLFRAKLISHLGLSENELIGTIPSEIGSFRLLQVLTLHSNRFTGQIPSTLTNLS
NLEYLSMGFNFLTGSLPSNVGLLYNLKNLSLNNNLLEGSIPSSITNCSHLLSIDLSHNKF
NGKIPRSLVQLPNLTALSLGPNEMSGEIPDDLFNCTNLKKLNLAENNFIGSIKPSIGNLV
NLQFLQLSYNSFVGSIPREIGNVSQLMSLWLHANSLSGLVPPELSKLSLLQGLFLHNNAL
EGTIPENIFEIKQLTSLWLLNNRFTGPIPSTFSKLEFLSYLDLSGNMLNGTVPKGMAQLS
RLTSLDLSHNHLTGVIPGAVIASMKNMQIYLNISHNFFAGTIPDELGMLEMVQVIDISNN
NLSGNIPETLKGCRNLYSLDLSGNKLAGPIPGKIFDKVNMLTSLNLSRNLLDEFAYIRTV
TTNVDVFSYGIIVMELLTKKRPTALTEEDGLSLSLPQLVDRALTNGIKRLLQVVDPRLAP
QVSKEQEIVEELLKLALSCTCTDPKDRPNMDEVLSSLLKLSKRLPRENCVLRDQGTASKC
AGSSSMRTLDDPNSGCSHLGSNERS
Download sequence
Identical sequences Achn376371

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]