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Domain assignment for gi|427735314|ref|YP_007054858.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|427735314|ref|YP_007054858.1|
Domain Number 1 Region: 283-417
Classification Level Classification E-value
Superfamily HlyD-like secretion proteins 0.0000000000000012
Family HlyD-like secretion proteins 0.0025
Further Details:      
 
Domain Number 2 Region: 145-212
Classification Level Classification E-value
Superfamily HlyD-like secretion proteins 0.000000101
Family HlyD-like secretion proteins 0.01
Further Details:      
 
Domain Number 3 Region: 215-278
Classification Level Classification E-value
Superfamily HlyD-like secretion proteins 0.0000157
Family HlyD-like secretion proteins 0.0048
Further Details:      
 
Weak hits

Sequence:  gi|427735314|ref|YP_007054858.1|
Domain Number - Region: 72-139
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0609
Family PDZ domain 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427735314|ref|YP_007054858.1|
Sequence length 613
Comment RND family efflux transporter MFP subunit [Rivularia sp. PCC 7116]
Sequence
MPFTAKPVILSQMKPSDNHEGMNHGDAPDNNLLTQATLLGGGIFLGGLLTIVGGFLLKRS
RKEDKKTVESSLRPGKTLLGIGIFVLLAGGIVTVTNQLKPASSMAGMEGHDMSGMSHDDM
MQVNGSFNPTPVTVKVVKPSLLSASVQYTGSIHPYQEVTVYPRIAGQLTNYSVYPGDKVT
SGQPLATLDAAEKLTQVAEAAANADSMETELEASQIEVNEQRQEIARLKAELEYQQKKRD
RYALLVKEGAISQDQYDIEDTKTQTAQAALKTAQVKLRRLEAQVRSARSNVKQARAKSAT
ASVMKGYTKIQSPIAGIVQERMADPGVVVQPSMGILKIGDYQRVRLRANVSQRDAAKIRV
GTPIIAKVPGSNVKEITGRVTSIFPQTNNDTRTVTIEAVVNNPGNQLLSGQFLEMQIITE
RQPNALTVPQSALTQFKNKTAVWVVDGETALRKIVTTGLVSGEQVEITNGLNPGDMVITS
GHSRLIENQKVSVVDESGETLALGNNTSQGNAQIKLISPQNKNSVKKGSAELILEILDKK
TNKPLPVENLDVKVTMPMKNMAPMTSMVDIQPDSQPGRFKVDTHFGMKGKWDVVVKVKDP
KHQGKADFDFNVE
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Identical sequences K9RA36
gi|427735314|ref|YP_007054858.1| WP_015117887.1.44015

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